Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.39□□□□□ -1.55
SHOX2O60902 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC118758.1-202ENST00000454719 225 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 RN7SL568P-201ENST00000493069 298 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 IGLV3-30-201ENST00000524362 298 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
SHOX2O60902 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC134669.1-201ENST00000581275 672 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 AL136131.3-201ENST00000607600 188 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 OR7M1P-201ENST00000608946 533 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC022919.1-201ENST00000624979 626 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.39□□□□□ -1.55
SHOX2O60902 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
SHOX2O60902 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 AC008627.1-201ENST00000517511 1704 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SHOX2O60902 AL353796.1-201ENST00000561542 3241 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SHOX2O60902 OR7E25P-201ENST00000344844 931 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 RN7SKP250-201ENST00000363924 321 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SHOX2O60902 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SHOX2O60902 RPS3AP2-201ENST00000407190 754 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.38□□□□□ -1.55
SHOX2O60902 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 CYCSP34-201ENST00000458172 304 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.38□□□□□ -1.55
SHOX2O60902 RPL29P23-201ENST00000486188 442 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC073073.1-201ENST00000493920 463 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 AC106822.1-201ENST00000502647 526 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC116917.1-201ENST00000520558 305 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC090022.1-201ENST00000546569 311 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.38□□□□□ -1.55
SHOX2O60902 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.38□□□□□ -1.55
SHOX2O60902 AC015982.1-201ENST00000608113 465 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 AC109583.2-201ENST00000617367 129 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHOX2O60902 NR1H5P-201ENST00000452683 1377 ntBASIC5.38□□□□□ -1.55
SHOX2O60902 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHOX2O60902 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHOX2O60902 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHOX2O60902 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHOX2O60902 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
SHOX2O60902 SALL4P2-201ENST00000423288 2910 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHOX2O60902 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.37□□□□□ -1.55
SHOX2O60902 YWHAZP6-201ENST00000399764 738 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 RNA5SP198-201ENST00000410376 127 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 E2F6P2-201ENST00000420708 748 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.37□□□□□ -1.55
SHOX2O60902 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.37□□□□□ -1.55
SHOX2O60902 GAPDHP59-201ENST00000435908 267 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.37□□□□□ -1.55
SHOX2O60902 TIMM8BP2-201ENST00000445940 251 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.37□□□□□ -1.55
SHOX2O60902 BX842559.2-201ENST00000451418 605 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.37□□□□□ -1.55
SHOX2O60902 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHOX2O60902 AC009120.1-201ENST00000493458 473 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.37□□□□□ -1.55
SHOX2O60902 AL158068.1-201ENST00000506116 616 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.37□□□□□ -1.55
SHOX2O60902 HMGB1P19-201ENST00000517578 577 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AC027308.1-201ENST00000517993 110 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms