Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC127024.6-201ENST00000621598 424 ntBASIC5.24□□□□□ -1.57
SSX4O60224 AC105105.5-201ENST00000622635 1294 ntBASIC5.24□□□□□ -1.57
SSX4O60224 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 AC009501.3-201ENST00000605001 1352 ntBASIC5.24□□□□□ -1.57
SSX4O60224 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SSX4O60224 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX4O60224 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX4O60224 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 MTCO1P11-201ENST00000429111 1528 ntBASIC5.23□□□□□ -1.57
SSX4O60224 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX4O60224 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 TMSB4XP2-201ENST00000335179 210 ntBASIC5.23□□□□□ -1.57
SSX4O60224 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 RNA5SP273-201ENST00000362484 113 ntBASIC5.23□□□□□ -1.57
SSX4O60224 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 SNORA70.6-201ENST00000383934 134 ntBASIC5.23□□□□□ -1.57
SSX4O60224 RNA5SP284-201ENST00000384547 118 ntBASIC5.23□□□□□ -1.57
SSX4O60224 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 RNA5SP178-201ENST00000410380 128 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 RPL35AP31-201ENST00000418340 337 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 MTND4P24-201ENST00000424002 397 ntBASIC5.23□□□□□ -1.57
SSX4O60224 EIF2S2P3-201ENST00000428356 999 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC046176.1-201ENST00000435260 1170 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AP000949.1-201ENST00000438328 629 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC074367.1-201ENST00000438685 1125 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 XKRY2-201ENST00000442362 1093 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC016908.1-201ENST00000442571 1219 ntBASIC5.23□□□□□ -1.57
SSX4O60224 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX4O60224 FRG2FP-204ENST00000453982 852 ntBASIC5.23□□□□□ -1.57
SSX4O60224 RANP2-201ENST00000456833 229 ntBASIC5.23□□□□□ -1.57
SSX4O60224 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 RN7SL197P-201ENST00000466981 299 ntBASIC5.23□□□□□ -1.57
SSX4O60224 RPSAP39-201ENST00000467439 883 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC074386.1-201ENST00000476560 767 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 LARP7P4-201ENST00000481075 878 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC124945.1-201ENST00000485133 188 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 SNORA26.10-201ENST00000516427 141 ntBASIC5.23□□□□□ -1.57
SSX4O60224 RNA5SP438-201ENST00000516561 112 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 MTND1P36-201ENST00000522384 936 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX4O60224 AC092865.1-201ENST00000544395 1023 ntBASIC5.23□□□□□ -1.57
SSX4O60224 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 LSM3P2-201ENST00000551246 273 ntBASIC5.23□□□□□ -1.57
SSX4O60224 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX4O60224 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 FAM106CP-201ENST00000582212 507 ntBASIC5.23□□□□□ -1.57
SSX4O60224 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 Z95327.3-201ENST00000610385 572 ntBASIC5.23□□□□□ -1.57
SSX4O60224 MIR6133-201ENST00000617057 108 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC138965.3-201ENST00000623875 498 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC073488.3-201ENST00000631611 778 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX4O60224 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX4O60224 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX4O60224 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.23□□□□□ -1.57
SSX4O60224 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX4O60224 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 MRRFP1-201ENST00000435941 1675 ntBASIC5.22□□□□□ -1.57
SSX4O60224 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX4O60224 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SSX4O60224 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX4O60224 RNFT1P3-201ENST00000340898 1052 ntBASIC5.22□□□□□ -1.57
SSX4O60224 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSX4O60224 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms