Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RN7SKP221-201ENST00000410420 301 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 MEG8-201ENST00000414488 800 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL7P57-201ENST00000423238 740 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC017019.1-201ENST00000426129 261 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL26P34-201ENST00000431005 451 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL7P28-201ENST00000437739 740 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL7AP71-201ENST00000451120 739 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC006967.1-201ENST00000467608 589 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL228P-201ENST00000470060 303 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 MED27-204ENST00000474263 762 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RN7SL41P-201ENST00000476144 297 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS12P31-201ENST00000491419 398 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC025445.1-201ENST00000502728 300 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 CSNK1A1P3-201ENST00000504105 330 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 OR4D12P-201ENST00000509361 911 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 IMPA1P1-201ENST00000510718 842 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP418-201ENST00000515951 117 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 OR7E158P-201ENST00000524483 910 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 OR7E1P-201ENST00000533891 958 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC092851.1-201ENST00000535964 478 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AGGF1P7-201ENST00000562369 913 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 SULT1C2P2-201ENST00000562517 294 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 KARS-209ENST00000568378 459 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC104117.5-201ENST00000606195 547 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC138904.2-201ENST00000614412 107 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AL138689.1-201ENST00000614612 668 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 MIR6723-201ENST00000621981 89 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 C18orf12-201ENST00000623329 537 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AC068870.1-201ENST00000563737 2455 ntBASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
CHKB-CPT1BH3BT56 AL031985.3-201ENST00000565390 2449 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL136164.3-201ENST00000624429 3978 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC027088.4-201ENST00000611559 1947 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC134882.1-201ENST00000603738 1676 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 FANCD2P2-201ENST00000437591 1400 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 Z83820.1-201ENST00000456978 1499 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP346-201ENST00000363541 121 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 SDHDP6-201ENST00000414693 480 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS4XP5-201ENST00000419038 768 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL391219.1-201ENST00000422570 483 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC130360.1-201ENST00000425489 1117 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 ETF1P1-206ENST00000427296 984 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC114402.2-201ENST00000432760 643 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 ST13P2-201ENST00000438916 1109 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS7P3-201ENST00000443360 580 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL512593.1-201ENST00000444758 779 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms