Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SOX5P1-201ENST00000524155 1127 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 MTCYBP27-201ENST00000555160 670 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC011497.2-201ENST00000600255 639 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC027334.1-201ENST00000603257 310 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL355802.4-201ENST00000607635 548 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AP000864.1-201ENST00000609424 650 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 uc_338.26-201ENST00000612659 160 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL138960.1-201ENST00000613838 513 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AP005431.1-201ENST00000618479 319 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC021422.1-201ENST00000621212 473 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 SHQ1P1-201ENST00000437111 1544 ntBASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
CTDP1Q9Y5B0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 RN7SKP292-201ENST00000365522 317 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 RNU6-1257P-201ENST00000384625 110 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL445213.1-201ENST00000412589 747 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL356968.2-201ENST00000412769 1257 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 RPL23AP18-201ENST00000416139 468 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL512637.2-201ENST00000431287 1256 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 MTND6P5-201ENST00000448266 512 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 RPL7L1P3-201ENST00000455249 689 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 snoU109.3-201ENST00000459477 145 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC074386.1-201ENST00000476560 767 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 TMEM97P2-201ENST00000517841 403 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC091515.1-201ENST00000548110 679 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL356801.1-201ENST00000559320 294 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC040904.1-201ENST00000590850 223 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 BNIP3P32-201ENST00000600015 554 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 MIR6768-201ENST00000610734 72 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AL590410.1-201ENST00000617925 333 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC074276.2-201ENST00000619891 348 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC019226.2-201ENST00000625973 424 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 MIR193BHG-214ENST00000641765 509 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 CUL4AP1-201ENST00000514750 1863 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC073365.1-203ENST00000641055 1992 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 PABPC1P8-201ENST00000452851 2086 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 AC092692.1-201ENST00000623625 2595 ntBASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTDP1Q9Y5B0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RNU1-150P-201ENST00000362491 162 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RNA5SP242-201ENST00000364171 118 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RN7SKP186-201ENST00000365371 303 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RN7SKP229-201ENST00000410465 302 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms