Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP001357.1-201ENST00000586304 1053 ntBASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 AC108738.1-201ENST00000603703 237 ntBASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.91□□□□□ -1.14
SHANK2Q9UPX8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC012213.2-201ENST00000562917 4597 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 SNORA70.2-201ENST00000364506 135 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL353625.1-202ENST00000366273 571 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 U3.28-201ENST00000391249 210 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL133482.1-201ENST00000415988 498 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC019050.1-201ENST00000418508 492 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL590399.2-201ENST00000427536 309 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 RPL34P20-201ENST00000442771 351 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC103987.1-201ENST00000473394 348 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AL161747.1-201ENST00000480068 358 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC006427.1-201ENST00000514359 712 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AC068831.8-201ENST00000620171 435 ntBASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK2Q9UPX8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHANK2Q9UPX8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
SHANK2Q9UPX8 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHANK2Q9UPX8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AL354868.1-201ENST00000417077 482 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 RN7SL814P-201ENST00000487715 300 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 RPS24P16-201ENST00000497294 392 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 OR5AN2P-201ENST00000534535 896 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AL110118.1-201ENST00000553543 400 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AP000919.1-201ENST00000582850 985 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AC009027.1-201ENST00000604510 479 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 AC015660.5-201ENST00000623238 564 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 Z95114.1-201ENST00000624264 14574 ntBASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.89□□□□□ -1.15
SHANK2Q9UPX8 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 RNA5SP505-201ENST00000364748 108 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 RN7SKP27-201ENST00000410684 333 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 NPM1P40-201ENST00000412758 733 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 P2RY10P2-201ENST00000416730 913 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 AC084824.2-201ENST00000548906 345 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms