Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 TRGV6-201ENST00000417928 299 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL358176.3-201ENST00000420757 454 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 NPM1P33-201ENST00000438918 872 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC023141.8-201ENST00000442554 208 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL590004.3-202ENST00000445883 451 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL157884.3-201ENST00000448273 1184 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 RPL12P30-201ENST00000488389 499 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 CR383658.1-201ENST00000514609 734 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 SEC11B-201ENST00000518383 499 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AP005901.4-201ENST00000577336 569 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC022400.9-201ENST00000623633 273 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AL357562.1-201ENST00000624911 609 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 AC011933.2-201ENST00000578539 2790 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 GNL2P1-201ENST00000451274 2190 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 CYP1D1P-201ENST00000416662 1433 ntBASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMCC3Q9ULS5 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RN7SKP78-201ENST00000364711 318 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RNA5SP91-201ENST00000390902 119 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RNA5SP487-201ENST00000410186 122 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RPS4XP5-201ENST00000419038 768 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RPS27AP6-201ENST00000427962 448 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AL445928.1-201ENST00000435545 222 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ARMC4P1-201ENST00000438905 707 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC015983.1-201ENST00000441577 373 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GEMIN8P3-201ENST00000445417 720 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 IFNWP4-201ENST00000453148 294 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 C1DP3-201ENST00000455013 423 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RNU6-1218P-201ENST00000458990 108 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC098818.1-201ENST00000478593 252 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GUSBP9-201ENST00000510138 584 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC108471.1-201ENST00000513977 287 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC090515.3-201ENST00000560431 315 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GARSP1-201ENST00000570895 719 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 BMS1P7-201ENST00000602440 1052 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC090953.1-201ENST00000604305 1092 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC092681.3-201ENST00000609463 678 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC012676.3-201ENST00000614983 479 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 VN2R3P-201ENST00000422626 1412 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 AC091046.3-201ENST00000631455 1574 ntBASIC5.38□□□□□ -1.55
TMCC3Q9ULS5 MUC2-202ENST00000613187 4845 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms