Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 KATNBL1P4-201ENST00000503545 918 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AC000068.2-201ENST00000608816 460 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MIR6133-201ENST00000617057 108 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 CASC19-264ENST00000641912 1184 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MT-RNR2-201ENST00000387347 1559 ntBASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP2Q9UDT6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 ICE2P1-201ENST00000512800 1849 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RNU6-171P-201ENST00000384354 107 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC005042.1-201ENST00000393397 800 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RPL7L1P9-201ENST00000431298 745 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AL163193.1-201ENST00000444895 788 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RPL7P45-201ENST00000455851 743 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC114982.2-201ENST00000461396 358 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RPS4XP1-201ENST00000482189 787 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 GAPDHP62-201ENST00000515313 990 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RN7SKP253-201ENST00000516424 309 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 RNA5SP34-201ENST00000516887 130 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 IGLV2-28-201ENST00000520681 304 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 OR4A43P-201ENST00000532938 908 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC078878.1-201ENST00000539832 958 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC027216.1-201ENST00000577726 685 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC013244.1-201ENST00000604279 193 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC021766.1-201ENST00000624404 741 ntBASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CLIP2Q9UDT6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC144833.1-201ENST00000567953 4089 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 SNORA70.6-201ENST00000383934 134 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 SNORA16A-201ENST00000384342 137 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 MIR1286-201ENST00000408112 78 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 RNF10P1-201ENST00000418589 369 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 TMEM183AP1-205ENST00000432739 290 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 CYCSP6-201ENST00000434498 302 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 NANOGP9-201ENST00000439890 892 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC008638.1-201ENST00000506035 866 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC105036.1-201ENST00000566222 271 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 AC019322.1-201ENST00000571869 389 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 SDR42E1P1-201ENST00000611327 477 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 MIR6837-201ENST00000620884 64 ntBASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CLIP2Q9UDT6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms