Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CNTN3Q9P232 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.36□□□□□ -1.23
CNTN3Q9P232 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNTN3Q9P232 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CNTN3Q9P232 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CNTN3Q9P232 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CNTN3Q9P232 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC015871.3-201ENST00000618835 2261 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 OR4G2P-201ENST00000328113 903 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 RN7SKP184-201ENST00000362348 333 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 RNU6-797P-201ENST00000363101 109 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 RNU4-91P-201ENST00000364778 135 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 RNU2-66P-201ENST00000410650 161 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 TPMTP3-201ENST00000411928 735 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 FNDC3CP-201ENST00000420795 1155 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 OR6K4P-201ENST00000423179 955 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 ISCA1P1-201ENST00000426679 387 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC010975.2-201ENST00000427781 588 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 MGAT2P1-201ENST00000449718 797 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AL034369.1-201ENST00000453808 477 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AL603882.1-201ENST00000463059 681 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 H3F3AP5-201ENST00000475267 429 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 OR4G11P-201ENST00000492842 939 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 MTND2P33-201ENST00000506452 1031 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 NACAP5-201ENST00000509863 636 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 NPM1P6-201ENST00000521088 871 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC118273.2-201ENST00000532092 465 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 ZNF519P3-201ENST00000557158 1032 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC012414.6-201ENST00000568241 401 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 SNORA70D-201ENST00000578836 135 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC024267.2-201ENST00000582737 417 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC091946.2-201ENST00000606105 291 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC013476.2-201ENST00000614456 459 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 RPL23AP61-201ENST00000623642 466 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 AC034229.6-201ENST00000623704 224 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CLUHP10-201ENST00000631979 980 ntBASIC7.35□□□□□ -1.23
CNTN3Q9P232 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.35□□□□□ -1.23
CNTN3Q9P232 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CNTN3Q9P232 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 PDZK1P1-202ENST00000425209 1350 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC073342.2-201ENST00000595842 1800 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AL353743.4-201ENST00000422653 1547 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 MAPK10-383ENST00000642032 3390 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 SNORA75-201ENST00000384158 137 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms