Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 AL117339.4-201ENST00000608335 7063 ntBASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 MSL3P1-202ENST00000440028 1468 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 HSPA8P17-201ENST00000427029 1382 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-666P-201ENST00000363499 107 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 SNORA40.3-201ENST00000390964 122 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-244P-201ENST00000391028 104 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 GSTA9P-201ENST00000406231 611 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RPSAP72-201ENST00000407020 358 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RNU2-22P-201ENST00000411266 212 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC023141.1-201ENST00000419418 379 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 NUP35P1-201ENST00000422734 947 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC003071.2-201ENST00000423857 315 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 IGLV3-4-201ENST00000432300 244 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 PSMC1P13-201ENST00000458195 985 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC016489.1-201ENST00000461109 375 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RN7SL282P-201ENST00000479676 297 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC131392.1-201ENST00000506490 633 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC138866.2-201ENST00000508650 584 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 GUSBP9-201ENST00000510138 584 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 SAP18P1-201ENST00000512058 390 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-430P-201ENST00000517078 107 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC078814.3-201ENST00000553036 491 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC006116.10-201ENST00000591836 581 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC010487.1-201ENST00000594408 1172 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC022239.4-201ENST00000602626 504 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC069499.2-201ENST00000610665 382 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC005899.7-201ENST00000618199 588 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC069209.1-201ENST00000619282 651 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC024023.1-201ENST00000624530 922 ntBASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CUEDC1Q9NWM3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 MTND5P16-201ENST00000460269 1703 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms