Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.52□□□□□ -1.37
CD248Q9HCU0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD248Q9HCU0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD248Q9HCU0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CD248Q9HCU0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD248Q9HCU0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 MTCO1P28-201ENST00000574177 1528 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC011815.2-201ENST00000618230 2021 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC092642.1-201ENST00000392417 425 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 LIPT1P1-201ENST00000415870 1186 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 CYCSP52-201ENST00000422857 310 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC017019.1-201ENST00000426129 261 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL589823.1-201ENST00000429577 183 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 CXCR2P1-202ENST00000443392 1074 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL590004.3-202ENST00000445883 451 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL031313.1-201ENST00000448435 256 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC021193.1-201ENST00000511607 420 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 RN7SKP35-201ENST00000517210 151 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 IGLV3-6-201ENST00000523937 250 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 TPRX1P1-201ENST00000557620 319 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC090666.1-201ENST00000578241 445 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AL139344.1-201ENST00000605228 195 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AC092608.3-201ENST00000625017 386 ntBASIC6.51□□□□□ -1.37
CD248Q9HCU0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD248Q9HCU0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD248Q9HCU0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD248Q9HCU0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD248Q9HCU0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC079753.1-201ENST00000623243 3868 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD248Q9HCU0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD248Q9HCU0 MTND4P8-201ENST00000514997 1362 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 RNU4-28P-201ENST00000364739 141 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 Y_RNA.604-201ENST00000410574 102 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 MARK2P12-201ENST00000420129 585 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 HIGD1AP4-201ENST00000430194 280 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC010240.2-201ENST00000445363 1205 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC097463.1-201ENST00000447288 481 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 SEPT7P3-201ENST00000455017 621 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 RN7SL643P-201ENST00000471845 291 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 OSBPL9P3-201ENST00000534523 595 ntBASIC6.5□□□□□ -1.37
CD248Q9HCU0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.5□□□□□ -1.37
CD248Q9HCU0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms