Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC007938.2-201ENST00000604666 2634 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 MIR585-201ENST00000384887 94 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 RNF10P1-201ENST00000418589 369 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC093815.1-201ENST00000508637 280 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 RN7SL708P-201ENST00000580952 299 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC010245.2-201ENST00000606908 1167 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AC090607.5-201ENST00000615692 224 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 AL078621.3-201ENST00000623707 2042 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL353625.1-202ENST00000366273 571 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 RNU1-74P-201ENST00000384108 171 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL133325.1-201ENST00000421090 382 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 FABP7P2-201ENST00000429946 379 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC073850.1-201ENST00000449243 255 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AP000797.2-201ENST00000475768 606 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 OR55B1P-203ENST00000641518 2602 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 UGT2B24P-201ENST00000514441 1597 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL109941.1-201ENST00000401925 229 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 RPL23AP27-201ENST00000415161 451 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 GSTM5P1-201ENST00000434751 660 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 RPL7P39-201ENST00000481157 744 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL049779.2-201ENST00000553847 315 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC093388.1-201ENST00000609166 430 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AL356608.1-201ENST00000610034 820 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 AC010632.3-201ENST00000611377 369 ntBASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KIAA1549Q9HCM3 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC006455.6-201ENST00000426192 893 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 RPL7AP61-201ENST00000443410 636 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 RN7SL423P-201ENST00000486202 304 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 RPSAP51-201ENST00000497462 645 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC109464.1-201ENST00000511091 819 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms