Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 CHIAP3-201ENST00000423668 1133 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 NOP56P2-201ENST00000447491 769 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 GLUD1P3-202ENST00000508551 200 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AP006289.1-201ENST00000538089 277 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 UGT2B24P-201ENST00000514441 1597 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AC104118.1-201ENST00000607625 1589 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 BX284613.1-201ENST00000452221 1641 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 ZNF812P-201ENST00000457674 1694 ntBASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK3Q9BYB0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 RNU1-74P-201ENST00000384108 171 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL591848.1-201ENST00000413092 322 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 RPL7P57-201ENST00000423238 740 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC079168.1-201ENST00000458741 345 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC130364.2-201ENST00000528639 604 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL391358.1-201ENST00000605342 190 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL161637.1-201ENST00000622380 412 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC079097.1-201ENST00000512187 1399 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL158152.1-201ENST00000602652 1435 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 GJA6P-201ENST00000415117 1042 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC069213.2-201ENST00000420238 366 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC063943.1-201ENST00000465434 453 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 GAPDHP56-201ENST00000506031 988 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC109635.6-201ENST00000525487 1113 ntBASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK3Q9BYB0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 RNA5SP332-201ENST00000391063 115 ntBASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 AC009480.2-201ENST00000422916 432 ntBASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 OR7E125P-201ENST00000443450 846 ntBASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 RPL10P17-201ENST00000453852 316 ntBASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK3Q9BYB0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms