Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 RNU6-481P-201ENST00000384194 107 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 RNA5SP187-201ENST00000384400 119 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 RNU6-796P-201ENST00000391086 107 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 MTATP6P20-201ENST00000414147 562 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC015977.1-201ENST00000418887 292 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 MTCO1P43-201ENST00000431831 488 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 EMC3-AS1-205ENST00000438698 534 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 RANP2-201ENST00000456833 229 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 TPT1P1-201ENST00000458495 518 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC104339.1-201ENST00000465478 348 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 RN7SL326P-201ENST00000477493 296 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC020779.1-201ENST00000478757 796 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 SYT14P1-201ENST00000481459 721 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC116562.1-201ENST00000485355 781 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 RPL37P23-201ENST00000492641 294 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC010374.1-201ENST00000503762 1237 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC021146.7-201ENST00000509604 775 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AP001207.2-201ENST00000519490 539 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC124891.1-201ENST00000536322 519 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 MRPS36P5-201ENST00000551909 298 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 MTCYBP27-201ENST00000555160 670 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 RN7SL230P-201ENST00000580835 303 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 CBX3P2-202ENST00000583365 535 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC026898.1-201ENST00000586404 571 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC005332.4-201ENST00000592752 579 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 BNIP3P24-201ENST00000593398 557 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL589863.1-201ENST00000595383 631 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 SNX6P1-201ENST00000601728 1224 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC099785.1-201ENST00000605697 437 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL683826.1-201ENST00000624104 627 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC138907.8-201ENST00000623981 2256 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 AL359091.1-201ENST00000449048 1734 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 MFSD8-220ENST00000641243 1422 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC008432.1-201ENST00000615912 1320 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 RNU5B-4P-201ENST00000363508 111 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 RNA5SP485-201ENST00000365053 119 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 PRELID1P1-201ENST00000403549 660 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 UBE2V1P9-201ENST00000414760 368 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL121878.1-201ENST00000418638 859 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms