Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RN7SL290P-201ENST00000578661 300 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 SNORD95-201ENST00000579879 68 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC060766.1-201ENST00000590824 627 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC010487.1-201ENST00000594408 1172 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC009027.1-201ENST00000604510 479 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC109583.2-201ENST00000617367 129 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AP005435.3-201ENST00000531260 3198 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC006484.1-201ENST00000435086 1884 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC079298.1-201ENST00000625026 1619 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AL078621.3-201ENST00000623707 2042 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 CASC19-248ENST00000641674 1356 ntBASIC5.55□□□□□ -1.52
CSPG4P5Q96PW8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 MTCO1P7-201ENST00000419523 1542 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 RNA5SP242-201ENST00000364171 118 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 RNA5SP241-201ENST00000391326 114 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 OR4K12P-201ENST00000406538 961 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 NACAP7-201ENST00000407371 609 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 NAP1L4P2-201ENST00000425958 899 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC124944.2-201ENST00000429866 1242 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 SETP20-201ENST00000457046 852 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 RPSAP39-201ENST00000467439 883 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC058823.1-201ENST00000485315 474 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 RBM22P1-201ENST00000578589 1214 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC107993.1-201ENST00000591343 684 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 SUGT1P3-202ENST00000604259 383 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 AC004477.3-201ENST00000614061 590 ntBASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSPG4P5Q96PW8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 RNA5SP435-201ENST00000364044 108 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 SNORA11.3-201ENST00000408471 128 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AL389925.1-201ENST00000432257 728 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 RPL19P16-201ENST00000433839 588 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC108751.3-201ENST00000461814 1020 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC093827.1-201ENST00000480094 861 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 RN7SL547P-201ENST00000490793 290 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 IMPA1P1-201ENST00000510718 842 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC092709.1-201ENST00000521355 1045 ntBASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.53□□□□□ -1.52
CSPG4P5Q96PW8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms