Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC007225.2-201ENST00000562529 256 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC005840.5-201ENST00000619166 599 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AC019072.1-201ENST00000604535 1551 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 AP005435.3-201ENST00000531260 3198 ntBASIC5.67□□□□□ -1.5
RPRD1AQ96P16 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.67□□□□□ -1.5
RPRD1AQ96P16 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 RN7SKP229-201ENST00000410465 302 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AL354766.1-201ENST00000423396 542 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 SPRYD7P1-201ENST00000443861 570 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AL133445.1-201ENST00000467051 452 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 RN7SL188P-201ENST00000469842 285 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 BX510359.5-201ENST00000515651 304 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC000068.2-201ENST00000608816 460 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC109309.2-201ENST00000612597 332 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC022467.1-201ENST00000614738 749 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 MIR6886-201ENST00000619864 61 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC000095.2-202ENST00000637415 154 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC092451.3-201ENST00000625067 1343 ntBASIC5.66□□□□□ -1.5
RPRD1AQ96P16 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPRD1AQ96P16 AC016745.2-201ENST00000608834 3443 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AL603750.1-201ENST00000624216 1717 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC009804.1-201ENST00000400949 179 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AL391361.1-201ENST00000405580 489 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 NPM1P4-201ENST00000414095 812 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 LINC02210-201ENST00000444561 288 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC105399.1-202ENST00000447303 205 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AZGP1P2-201ENST00000454506 345 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 MTND6P2-201ENST00000512226 524 ntBASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.65□□□□□ -1.5
RPRD1AQ96P16 SCARNA16.4-201ENST00000516956 187 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms