Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC010503.3-201ENST00000594355 540 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 MTCO3P22-201ENST00000603219 784 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC026741.1-201ENST00000605892 482 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC092266.1-201ENST00000610958 165 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC003992.1-201ENST00000635364 557 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 OR5AC4P-202ENST00000642086 985 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS50Q96JG6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS50Q96JG6 AC106754.1-201ENST00000562632 1513 ntBASIC5.89□□□□□ -1.47
VPS50Q96JG6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 OR7E156P-201ENST00000400303 464 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 RN7SKP240-201ENST00000410583 375 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 EIF5AP4-201ENST00000441206 465 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AL096829.2-201ENST00000446582 742 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AL157884.3-201ENST00000448273 1184 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 NPM1P19-201ENST00000450070 712 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 HIGD1AP16-201ENST00000450986 258 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC112187.1-201ENST00000455837 479 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 RBBP4P1-201ENST00000502424 1276 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 PRELID3BP6-201ENST00000503839 571 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 UBE2V1P12-201ENST00000503954 474 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC096571.1-202ENST00000506634 735 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC026407.1-201ENST00000518369 204 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC008429.4-201ENST00000521201 182 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 CIR1P1-201ENST00000524055 1133 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC027026.1-201ENST00000532323 742 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC090666.1-201ENST00000578241 445 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC005726.4-201ENST00000582858 458 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AP005136.2-201ENST00000583253 1049 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC008507.3-201ENST00000585753 472 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AP000864.1-201ENST00000609424 650 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC245014.3-201ENST00000618589 347 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC015660.5-201ENST00000623238 564 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 AC239868.2-201ENST00000564237 4527 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 MTND5P23-201ENST00000430812 1655 ntBASIC5.88□□□□□ -1.47
VPS50Q96JG6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS50Q96JG6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
VPS50Q96JG6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 RNA5SP346-201ENST00000363541 121 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AL157702.1-201ENST00000398764 426 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 RNA5SP156-201ENST00000410250 110 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 NIFKP3-201ENST00000417799 865 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MTCO2P23-201ENST00000425216 680 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC115283.1-201ENST00000427353 400 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms