Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC130360.2-201ENST00000533477 1556 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 RNA5SP319-201ENST00000362768 119 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 RNA5SP335-201ENST00000363817 110 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL512422.1-201ENST00000407033 553 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL513325.1-201ENST00000417716 1034 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 BTBD7P2-201ENST00000441962 620 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC100832.1-201ENST00000471945 383 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 EIF1P7-201ENST00000487533 337 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 RN7SL547P-201ENST00000490793 290 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 RN7SL101P-201ENST00000496350 279 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 HMGB1P44-201ENST00000508597 572 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 HMGN1P9-201ENST00000515212 298 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 SNORA81.2-201ENST00000516868 170 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 RN7SKP5-201ENST00000517045 272 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 IGLVIV-64-201ENST00000518581 301 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 SUGT1P3-202ENST00000604259 383 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL162574.1-201ENST00000615702 950 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 MIR8080-201ENST00000622224 89 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AL353684.1-201ENST00000622677 1120 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 AC099654.6-201ENST00000636487 512 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 Z83820.1-201ENST00000456978 1499 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
SEMA4DQ92854 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 BCORP1-203ENST00000513194 5093 ntBASIC5.82□□□□□ -1.48
SEMA4DQ92854 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEMA4DQ92854 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 MTND3P20-201ENST00000407663 186 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 CHEK2P5-201ENST00000423877 246 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 FAM204CP-201ENST00000424489 642 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AL672138.1-201ENST00000450604 1015 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 RN7SL51P-201ENST00000468230 285 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 SCARNA16.4-201ENST00000516956 187 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AL021368.1-201ENST00000607490 540 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 uc_338.7-201ENST00000621834 124 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AP001153.1-201ENST00000641024 338 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.81□□□□□ -1.48
SEMA4DQ92854 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEMA4DQ92854 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SEMA4DQ92854 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
SEMA4DQ92854 CASC19-248ENST00000641674 1356 ntBASIC5.8□□□□□ -1.48
SEMA4DQ92854 OFD1P17-201ENST00000437639 3018 ntBASIC5.8□□□□□ -1.48
SEMA4DQ92854 ADAM24P-201ENST00000398655 2101 ntBASIC5.8□□□□□ -1.48
SEMA4DQ92854 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SEMA4DQ92854 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
SEMA4DQ92854 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEMA4DQ92854 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms