Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 CASC19-248ENST00000641674 1356 ntBASIC5.38□□□□□ -1.55
TM9SF4Q92544 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
TM9SF4Q92544 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF4Q92544 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 SNORA74A-201ENST00000364089 198 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 RN7SKP124-201ENST00000364730 341 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 MIR1178-201ENST00000408396 91 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 RN7SKP29-201ENST00000410957 272 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 METTL15P3-201ENST00000415522 1221 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC113412.1-201ENST00000425840 504 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL662874.1-201ENST00000426065 230 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC099670.2-201ENST00000435130 321 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 NPM1P48-201ENST00000436002 853 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC005297.1-201ENST00000444765 862 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL450996.1-201ENST00000445574 1202 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 MTND2P39-201ENST00000457230 764 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 DUTP7-201ENST00000507982 486 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 SNORA70.11-201ENST00000515987 138 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 RNU6-1334P-201ENST00000516032 105 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 SNORA70.13-201ENST00000516116 138 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 RNA5SP34-201ENST00000516887 130 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 SCARNA6.1-201ENST00000516989 238 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 RBM22P12-201ENST00000567098 1255 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 GARSP1-201ENST00000570895 719 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 TXNP4-201ENST00000575018 310 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC006115.2-201ENST00000596823 202 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC144521.1-201ENST00000607148 956 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 SNORA35B-201ENST00000607417 129 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC079776.5-201ENST00000641920 211 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AP005435.3-201ENST00000531260 3198 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 TET1P1-201ENST00000426627 2301 ntBASIC5.37□□□□□ -1.55
TM9SF4Q92544 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM9SF4Q92544 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.37□□□□□ -1.55
TM9SF4Q92544 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 AC130304.1-201ENST00000622942 2385 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 OR9K1P-201ENST00000326513 941 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 SNORA64.1-201ENST00000362600 132 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 RNU6-891P-201ENST00000384280 111 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 MT-RNR1-201ENST00000389680 954 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 RMRPP5-201ENST00000411156 267 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 GABARAPL3-201ENST00000412799 354 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 AL158827.1-201ENST00000416300 391 ntBASIC5.36□□□□□ -1.55
TM9SF4Q92544 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF4Q92544 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF4Q92544 AP000949.1-201ENST00000438328 629 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms