Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG4AQ8WYN0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.96□□□□□ -1.45
ATG4AQ8WYN0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 RNFT1P3-201ENST00000340898 1052 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP185-201ENST00000362813 326 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP29-201ENST00000410957 272 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC097463.1-201ENST00000447288 481 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 MTND2P8-201ENST00000450555 1025 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC092865.4-201ENST00000477936 615 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC044810.1-201ENST00000480271 711 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 RN7SL612P-201ENST00000497704 295 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 GAPDHP62-201ENST00000515313 990 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC010376.1-201ENST00000522101 334 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AP003033.2-201ENST00000528901 805 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC004923.2-201ENST00000529649 369 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC139103.1-201ENST00000534696 1030 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC087894.1-201ENST00000538359 518 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC084824.2-201ENST00000548906 345 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC121758.1-202ENST00000556917 658 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AGGF1P9-201ENST00000561884 913 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 MIR4509-3-201ENST00000578671 94 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 MIR4509-2-201ENST00000583920 94 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC008507.2-201ENST00000588402 1176 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC011492.1-201ENST00000600023 315 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AF230666.2-201ENST00000602328 725 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 MTCO3P22-201ENST00000603219 784 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC098935.2-201ENST00000604222 466 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC097065.2-201ENST00000608159 533 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC097478.2-201ENST00000610572 514 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC005899.7-201ENST00000618199 588 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 MIR4509-1-201ENST00000618224 94 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC048341.3-201ENST00000619323 491 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AC090617.9-201ENST00000623751 147 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 UGT2B24P-201ENST00000514441 1597 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 HSPD1P9-201ENST00000420325 1636 ntBASIC5.96□□□□□ -1.46
ATG4AQ8WYN0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 RNA5SP326-201ENST00000363209 110 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 RNU5E-10P-201ENST00000363506 118 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC096921.1-201ENST00000411661 375 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL357752.1-201ENST00000412817 349 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 PCNPP4-201ENST00000414817 517 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 BX664727.1-201ENST00000416024 466 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms