Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AL031123.3-201ENST00000623345 1837 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC083837.1-201ENST00000565297 2994 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MIR23B-201ENST00000384832 97 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 RN7SL423P-201ENST00000486202 304 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AL445423.1-201ENST00000609941 536 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MLECP1-201ENST00000615893 709 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC011933.2-201ENST00000578539 2790 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AL050305.1-201ENST00000399993 1230 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 RPL21P108-201ENST00000413857 481 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 OR2B7P-201ENST00000429302 934 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 RPL26P30-202ENST00000602923 645 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC067959.1-201ENST00000604334 379 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC004074.1-201ENST00000421810 1063 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC010733.1-201ENST00000451515 401 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC034236.1-201ENST00000469891 373 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AL513327.3-201ENST00000602618 469 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 RNA5SP191-201ENST00000362585 102 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC009480.2-201ENST00000422916 432 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC016027.5-201ENST00000427227 210 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NPM1P33-201ENST00000438918 872 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 SCARNA16.4-201ENST00000516956 187 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AP001880.2-201ENST00000538233 448 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AL049779.3-201ENST00000557141 606 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC019193.2-201ENST00000610012 634 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 MIR105-1-201ENST00000385222 81 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AP003170.5-201ENST00000397185 335 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 RN7SKP263-201ENST00000411194 309 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ATG4AP1-201ENST00000416893 538 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 EEF1A1P1-201ENST00000447052 739 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC079080.1-201ENST00000479841 822 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms