Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 PPIAP24-201ENST00000328558 471 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 SNORA72.1-201ENST00000363485 129 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RN7SKP129-201ENST00000410288 299 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL139158.1-201ENST00000424719 340 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC010975.2-201ENST00000427781 588 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC002069.1-201ENST00000429649 1159 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 MTND1P30-201ENST00000441241 901 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 CASP3P1-201ENST00000446037 609 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AURKAPS1-201ENST00000451805 1212 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RPL26P30-201ENST00000453533 435 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC107015.1-201ENST00000466902 747 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RPL7AP23-201ENST00000482625 776 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RN7SL413P-201ENST00000482700 297 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RPS4XP23-201ENST00000487801 237 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RN7SL104P-201ENST00000498686 293 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC112225.1-201ENST00000508230 297 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 SUMO2P7-201ENST00000511179 285 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC133963.2-201ENST00000513686 578 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RNU6-718P-201ENST00000516166 105 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 OR5AL2P-201ENST00000532185 920 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 ULK4P1-202ENST00000565174 503 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC044792.1-201ENST00000593294 196 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC063977.7-201ENST00000594454 337 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC119501.1-201ENST00000603646 475 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC091805.2-201ENST00000603848 235 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC011374.2-201ENST00000607135 526 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC009237.15-201ENST00000610252 501 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 Y_RNA.804-201ENST00000615262 101 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL121873.1-201ENST00000616013 524 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL591926.1-201ENST00000620542 217 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL683826.1-201ENST00000624104 627 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AC183089.2-201ENST00000637931 916 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 NBPF8-201ENST00000583271 5330 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 MAPK10-357ENST00000641831 2858 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 AL133268.1-201ENST00000405676 1401 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 RNFT1P3-201ENST00000340898 1052 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 RNU6-181P-201ENST00000363225 107 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 SNORA70.3-201ENST00000365075 132 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 MIR1275-201ENST00000408770 80 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 RN7SKP86-201ENST00000410454 332 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 AC006960.1-201ENST00000419980 153 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 MRPS36P1-201ENST00000421291 307 ntBASIC7.04□□□□□ -1.28
SHKBP1Q8TBC3 FABP5P1-201ENST00000423401 411 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms