Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC069304.1-201ENST00000491593 704 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 RPS24P16-201ENST00000497294 392 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC016559.2-201ENST00000510759 359 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC138517.1-201ENST00000515724 568 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 SCARNA18.1-201ENST00000516330 83 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 TMEM97P2-201ENST00000517841 403 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC008676.3-201ENST00000521237 435 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC122134.1-201ENST00000565664 1104 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AL078601.3-201ENST00000573303 535 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SL230P-201ENST00000580835 303 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 PRPF19P1-201ENST00000584766 898 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 QTRT1P1-201ENST00000604344 1078 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC012676.3-201ENST00000614983 479 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC004801.6-201ENST00000616571 978 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AC100757.1-201ENST00000616872 1835 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 AP003499.2-201ENST00000624100 483 ntBASIC4.59□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC71LQ8N9Z2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 PSG10P-201ENST00000501199 1500 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC093225.1-201ENST00000506867 1408 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RNU6-1331P-201ENST00000363658 106 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC007618.1-201ENST00000366455 732 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RNU6-1320P-201ENST00000390838 107 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RNU6-1269P-201ENST00000391139 107 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RN7SKP146-201ENST00000410242 334 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 OR51A6P-201ENST00000418680 1004 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AK4P4-201ENST00000419465 646 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC017019.1-201ENST00000426129 261 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 TPTE2P1-204ENST00000435256 593 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 GAPDHP48-201ENST00000436626 961 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RPL6P30-201ENST00000443382 862 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC097463.1-201ENST00000447288 481 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 OR52Y1P-201ENST00000452418 828 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RPL36AP55-201ENST00000454114 305 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RNU6-599P-201ENST00000459383 107 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RNU6-1193P-201ENST00000459461 107 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RPL32P33-201ENST00000487023 394 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MYL12BP2-201ENST00000503948 512 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 DUTP7-201ENST00000507982 486 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 HMGN1P9-201ENST00000515212 298 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC021678.3-201ENST00000517893 476 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MT1CP-201ENST00000567054 174 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MTCYBP13-201ENST00000578634 1093 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC108738.1-201ENST00000603703 237 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 AC096553.1-201ENST00000605169 829 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 FAM27E4-201ENST00000605259 342 ntBASIC4.58□□□□□ -1.68
CCDC71LQ8N9Z2 MIR6885-201ENST00000612241 66 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms