Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 AL355834.1-201ENST00000556602 3965 ntBASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 AL121839.2-201ENST00000565058 6943 ntBASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LINC00346Q8IVM7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RNU1-146P-201ENST00000364015 165 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RN7SKP171-201ENST00000364417 303 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 MIR130B-202ENST00000385018 82 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RN7SKP86-201ENST00000410454 332 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 UBE2V1P11-201ENST00000411559 285 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RPL35AP3-201ENST00000414680 288 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RPL5P7-201ENST00000444235 813 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 CASP3P1-201ENST00000446037 609 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC002553.2-201ENST00000453217 340 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC023245.1-201ENST00000468501 517 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC106806.2-201ENST00000509365 500 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 RN7SKP238-201ENST00000516483 249 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 HAUS1P3-201ENST00000523909 662 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC139697.1-201ENST00000548429 745 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL163952.1-202ENST00000569625 600 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AP005119.1-201ENST00000580956 292 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 MIR4420-201ENST00000583944 77 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AP001357.1-201ENST00000586304 1053 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC006115.2-201ENST00000596823 202 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL133481.2-203ENST00000607558 139 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC084824.5-201ENST00000612009 413 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AL121890.2-201ENST00000617644 465 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC097460.3-201ENST00000623099 442 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC000095.2-202ENST00000637415 154 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC099654.15-201ENST00000639802 509 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 OR11H2-202ENST00000641517 1085 ntBASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LINC00346Q8IVM7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 SELENOWP1-201ENST00000322792 252 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 SNORA51.9-201ENST00000384295 124 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 U3.23-201ENST00000391132 200 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 NPM1P40-201ENST00000412758 733 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 TRGV6-201ENST00000417928 299 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 RPSAP40-201ENST00000442343 891 ntBASIC5.17□□□□□ -1.58
LINC00346Q8IVM7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms