Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL662795.2-201ENST00000624252 3706 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 RNU6-623P-201ENST00000363143 105 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 RNU4-24P-201ENST00000364565 139 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 HMGB3P19-201ENST00000403971 560 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 RN7SKP97-201ENST00000410966 333 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC022028.1-201ENST00000412054 408 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL354890.1-201ENST00000413730 346 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 RPL35AP3-201ENST00000414680 288 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 NIFKP3-201ENST00000417799 865 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 NMD3P2-201ENST00000421815 761 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL589823.1-201ENST00000429577 183 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TXNP2-201ENST00000443918 295 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL162739.1-201ENST00000450606 307 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 OR52Y1P-201ENST00000452418 828 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC092155.2-201ENST00000454675 477 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 Z83838.1-202ENST00000456225 839 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC019084.1-201ENST00000457337 432 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 TPT1P1-201ENST00000458495 518 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 RN7SL269P-201ENST00000467795 305 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC098847.1-201ENST00000473094 348 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 RPL23AP40-201ENST00000487630 390 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC114728.1-201ENST00000488289 483 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC134050.1-201ENST00000495088 933 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC107401.1-201ENST00000503426 685 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC008429.4-201ENST00000521201 182 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 MTCYBP20-201ENST00000524239 1129 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC084373.1-201ENST00000603311 235 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL136097.3-201ENST00000611097 505 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC005899.7-201ENST00000618199 588 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC096708.4-201ENST00000620563 552 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AL136228.1-201ENST00000622221 319 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC073593.1-201ENST00000624500 411 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC009501.3-201ENST00000605001 1352 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 LYARP1-201ENST00000436977 1501 ntBASIC5.89□□□□□ -1.47
VRK3Q8IV63 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VRK3Q8IV63 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VRK3Q8IV63 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC068769.1-201ENST00000474767 2426 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms