Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 RNU6-362P-201ENST00000516736 90 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AL845552.1-201ENST00000556820 323 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC133552.4-201ENST00000576103 676 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC060780.2-201ENST00000589047 198 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC010503.3-201ENST00000594355 540 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 PSMA6P4-201ENST00000603247 718 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 uc_338.31-201ENST00000615595 186 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AL122023.1-201ENST00000622847 530 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 AC004808.2-201ENST00000627965 773 ntBASIC5.18□□□□□ -1.58
C11orf88Q6PI97 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.18□□□□□ -1.58
C11orf88Q6PI97 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AL445238.1-204ENST00000400311 463 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 SNORA11.3-201ENST00000408471 128 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC105402.1-201ENST00000413336 545 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 RPL21P50-201ENST00000417698 477 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC083862.1-201ENST00000427378 1242 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 EMC3-AS1-205ENST00000438698 534 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 POU5F1P5-201ENST00000445059 658 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 MORF4-201ENST00000447135 971 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 OR7E22P-201ENST00000478335 1035 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC124945.1-201ENST00000485133 188 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 RN7SL714P-201ENST00000487050 298 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC018645.1-201ENST00000505003 109 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 HMGN1P16-201ENST00000508308 283 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 MAST4-IT1-201ENST00000514241 658 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 NOP56P3-201ENST00000549457 385 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 SNORA11.6-201ENST00000619030 128 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC103703.1-201ENST00000634783 663 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC111152.1-202ENST00000635848 339 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC005332.5-201ENST00000591222 2919 ntBASIC5.17□□□□□ -1.58
C11orf88Q6PI97 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C11orf88Q6PI97 RPL31P11-201ENST00000426558 1558 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 AC079298.1-201ENST00000625026 1619 ntBASIC5.16□□□□□ -1.58
C11orf88Q6PI97 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C11orf88Q6PI97 U3.10-201ENST00000364459 214 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms