Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC012213.2-201ENST00000562917 4597 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 RNU6-236P-201ENST00000363886 106 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 RN7SKP191-201ENST00000364713 306 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ERHP2-201ENST00000402323 299 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 NPM1P4-201ENST00000414095 812 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 MTATP6P27-201ENST00000416987 621 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 FNDC3CP-201ENST00000420795 1155 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 IPPKP1-201ENST00000422501 768 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 SPATA20P1-201ENST00000423089 438 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 USP12PX-201ENST00000432383 1057 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC245291.3-201ENST00000443400 292 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 TPMTP4-201ENST00000450749 678 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AURKAPS1-201ENST00000451805 1212 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 CTSLP6-201ENST00000458273 1002 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 RN7SL492P-201ENST00000460700 295 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC063943.2-201ENST00000495697 534 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC008837.1-201ENST00000511513 412 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 MTCYBP44-201ENST00000514835 823 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 SCARNA15.1-201ENST00000516384 125 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 RNA5SP278-201ENST00000517055 102 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC104417.1-201ENST00000523974 751 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC005000.1-201ENST00000536192 288 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC007537.1-201ENST00000539347 327 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC010198.2-201ENST00000550612 259 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC026458.1-201ENST00000564330 438 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 RPS4XP21-201ENST00000603814 750 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC007255.2-201ENST00000604053 631 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AP005212.3-201ENST00000619964 528 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 AL591926.1-201ENST00000620542 217 ntBASIC7.13□□□□□ -1.27
RNF43Q68DV7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF43Q68DV7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RNF43Q68DV7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 NEK2P4-201ENST00000425793 1329 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC011477.1-204ENST00000623416 1325 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 RNY4P24-201ENST00000362735 96 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 SNORA72.1-201ENST00000363485 129 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 RN7SKP33-201ENST00000410942 340 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms