Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 RN7SKP149-201ENST00000363008 344 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 GJA6P-201ENST00000415117 1042 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC093720.1-201ENST00000505681 714 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 COX6B1P5-201ENST00000509843 249 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 RNA5SP143-201ENST00000516936 115 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC092692.1-201ENST00000623625 2595 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 AL445189.1-201ENST00000405722 338 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 RPSAP35-201ENST00000413753 818 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 CENPIP1-201ENST00000425713 902 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRK2Q5S007 RPL34P20-201ENST00000442771 351 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 PPIAP21-201ENST00000464473 501 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 RNA5SP43-201ENST00000516559 110 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 GTF2IP11-201ENST00000526931 420 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 AC053481.3-201ENST00000577881 843 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 ASNSP1-204ENST00000641977 1664 ntBASIC4.69□□□□□ -1.66
LRRK2Q5S007 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LRRK2Q5S007 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 BX284613.1-201ENST00000452221 1641 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 DMD-211ENST00000378707 7410 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 RNA5SP388-201ENST00000362584 119 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC069213.2-201ENST00000420238 366 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC004074.1-201ENST00000421810 1063 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 RPL12P34-201ENST00000424532 479 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 CDC27P1-201ENST00000445384 715 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 RPL7L1P8-201ENST00000469911 741 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC097484.1-201ENST00000471148 389 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL132640.2-201ENST00000559968 1698 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC130304.1-201ENST00000622942 2385 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 MIR134-201ENST00000385258 73 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL050305.1-201ENST00000399993 1230 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 HMGB3P7-201ENST00000400214 611 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 OR13K1P-201ENST00000444577 975 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC090424.1-201ENST00000535243 736 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 AC011944.2-201ENST00000624440 683 ntBASIC4.68□□□□□ -1.66
LRRK2Q5S007 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRK2Q5S007 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRK2Q5S007 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC099654.2-201ENST00000433031 1980 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms