Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HIST1H1AQ02539 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC068870.1-201ENST00000563737 2455 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RNA5SP500-201ENST00000364486 119 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC004386.1-201ENST00000393214 761 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RIMKLBP2-201ENST00000424737 654 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 GAPDHP48-201ENST00000436626 961 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC073465.2-201ENST00000440938 498 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 IGBP1P3-201ENST00000447449 1000 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RN7SL515P-201ENST00000463999 297 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC022215.1-201ENST00000481770 362 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RPL9P15-201ENST00000491096 532 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 OR9N1P-201ENST00000491296 333 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AL117692.1-201ENST00000494283 713 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC025458.1-201ENST00000506046 166 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RNA5SP438-201ENST00000516561 112 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 SEPT10P1-201ENST00000517342 1162 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC021678.3-201ENST00000517893 476 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC092121.1-201ENST00000569452 202 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC010632.3-201ENST00000611377 369 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 AC011447.7-201ENST00000624228 1590 ntBASIC4.22□□□□□ -1.73
HIST1H1AQ02539 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HIST1H1AQ02539 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HIST1H1AQ02539 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HIST1H1AQ02539 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.21□□□□□ -1.73
HIST1H1AQ02539 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.21□□□□□ -1.73
HIST1H1AQ02539 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HIST1H1AQ02539 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HIST1H1AQ02539 AC000374.1-201ENST00000434698 1745 ntBASIC4.21□□□□□ -1.73
HIST1H1AQ02539 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.21□□□□□ -1.73
HIST1H1AQ02539 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 MTHFD2P5-201ENST00000320415 844 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AL159987.1-201ENST00000347911 293 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RNA5SP273-201ENST00000362484 113 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RNA5SP477-201ENST00000362639 119 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RN7SKP28-201ENST00000364770 305 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 SUGT1P2-201ENST00000379452 992 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RMRPP5-201ENST00000411156 267 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 BX323845.3-201ENST00000428215 527 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 NDUFB4P8-201ENST00000435351 367 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 NANOGP9-201ENST00000439890 892 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC068491.1-201ENST00000449539 1241 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC019084.1-201ENST00000457337 432 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RPL21P6-201ENST00000479171 504 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AP002884.1-201ENST00000479691 655 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RPL7AP10-201ENST00000481016 791 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 H3F3BP2-201ENST00000583907 357 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms