Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.18□□□□□ -1.58
CACNA1BQ00975 DHX40P1-201ENST00000588725 1412 ntBASIC5.18□□□□□ -1.58
CACNA1BQ00975 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CACNA1BQ00975 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CACNA1BQ00975 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 OR55B1P-203ENST00000641518 2602 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 RPS6P23-201ENST00000413224 722 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 RPL23AP60-201ENST00000450011 454 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 BGLT3-201ENST00000564523 994 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 RNU4ATAC-201ENST00000580972 127 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC069366.1-201ENST00000583159 838 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 AL356752.1-201ENST00000615844 593 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 HSPA8P15-201ENST00000401676 786 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC092647.2-201ENST00000452998 253 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC073610.1-201ENST00000489971 396 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 AL445567.2-201ENST00000618935 498 ntBASIC5.17□□□□□ -1.58
CACNA1BQ00975 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.17□□□□□ -1.58
CACNA1BQ00975 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 AC130304.1-201ENST00000622942 2385 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 AL353796.1-201ENST00000561542 3241 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 SNORA73.1-201ENST00000363107 205 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 RNA5SP211-201ENST00000365516 117 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 CENPIP1-201ENST00000425713 902 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 AL590399.4-201ENST00000436561 601 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 AC007494.1-201ENST00000562293 760 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 MIR4737-201ENST00000583979 81 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 AL953862.2-201ENST00000603089 820 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 AC112200.1-201ENST00000625015 234 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 AC008957.3-201ENST00000624112 2242 ntBASIC5.16□□□□□ -1.58
CACNA1BQ00975 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CACNA1BQ00975 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
CACNA1BQ00975 RNA5SP372-201ENST00000390836 115 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC092824.1-201ENST00000483524 576 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC139365.2-201ENST00000517972 253 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC107016.1-201ENST00000550463 337 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 uc_338.26-201ENST00000612659 160 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 AC015722.2-201ENST00000622210 551 ntBASIC5.15□□□□□ -1.58
CACNA1BQ00975 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
CACNA1BQ00975 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms