Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HSPE1P2-201ENST00000554777 306 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.83□□□□□ -1.64
VBP1P61758 OR1E3-201ENST00000575608 948 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC068768.2-201ENST00000602352 343 ntBASIC4.83□□□□□ -1.64
VBP1P61758 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.83□□□□□ -1.64
VBP1P61758 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
VBP1P61758 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.83□□□□□ -1.64
VBP1P61758 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VBP1P61758 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
VBP1P61758 LINC01613-201ENST00000561476 2780 ntBASIC4.83□□□□□ -1.64
VBP1P61758 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
VBP1P61758 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VBP1P61758 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.82□□□□□ -1.64
VBP1P61758 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.82□□□□□ -1.64
VBP1P61758 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.82□□□□□ -1.64
VBP1P61758 CR382285.2-201ENST00000624662 1495 ntBASIC4.82□□□□□ -1.64
VBP1P61758 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
VBP1P61758 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VBP1P61758 AC063976.2-201ENST00000425667 3556 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 AL159987.1-201ENST00000347911 293 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 RNU1-19P-201ENST00000363306 165 ntBASIC4.82□□□□□ -1.64
VBP1P61758 RNU1-74P-201ENST00000384108 171 ntBASIC4.82□□□□□ -1.64
VBP1P61758 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
VBP1P61758 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 PCMTD1P3-201ENST00000451824 472 ntBASIC4.82□□□□□ -1.64
VBP1P61758 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 AC130366.1-201ENST00000526505 1192 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 AC011840.5-201ENST00000582125 771 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
VBP1P61758 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC103564.3-201ENST00000621194 220 ntBASIC4.82□□□□□ -1.64
VBP1P61758 KDM5DP1-201ENST00000622542 298 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC015908.5-201ENST00000623289 343 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC117503.3-201ENST00000623811 601 ntBASIC4.82□□□□□ -1.64
VBP1P61758 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VBP1P61758 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
VBP1P61758 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VBP1P61758 AC091046.3-201ENST00000631455 1574 ntBASIC4.82□□□□□ -1.64
VBP1P61758 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.81□□□□□ -1.64
VBP1P61758 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
VBP1P61758 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 SMG1P6-201ENST00000532337 2930 ntBASIC4.81□□□□□ -1.64
VBP1P61758 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 RNU6-178P-201ENST00000384631 104 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AC013442.1-201ENST00000397347 228 ntBASIC4.81□□□□□ -1.64
VBP1P61758 ATP5F1P2-201ENST00000398143 760 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.81□□□□□ -1.64
VBP1P61758 AC012519.1-201ENST00000424588 610 ntBASIC4.81□□□□□ -1.64
VBP1P61758 GAPDHP19-201ENST00000431768 1005 ntBASIC4.81□□□□□ -1.64
VBP1P61758 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.81□□□□□ -1.64
VBP1P61758 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.81□□□□□ -1.64
VBP1P61758 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VBP1P61758 BTF3P6-201ENST00000448054 499 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.81□□□□□ -1.64
VBP1P61758 AC009244.1-201ENST00000450566 258 ntBASIC4.81□□□□□ -1.64
VBP1P61758 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.81□□□□□ -1.64
VBP1P61758 RPS12P20-201ENST00000464109 380 ntBASIC4.81□□□□□ -1.64
VBP1P61758 AC092865.4-201ENST00000477936 615 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms