Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP003973.1-201ENST00000604639 691 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 RBM11P1-201ENST00000604951 799 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC087752.4-201ENST00000605911 462 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC006270.3-201ENST00000605967 1036 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.15□□□□□ -1.42
GFRA1P56159 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.15□□□□□ -1.42
GFRA1P56159 PCMTD1P7-201ENST00000634506 357 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 AC006927.3-201ENST00000638789 384 ntBASIC6.15□□□□□ -1.42
GFRA1P56159 TMEM75-201ENST00000624314 2165 ntBASIC6.15□□□□□ -1.43
GFRA1P56159 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.15□□□□□ -1.43
GFRA1P56159 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.15□□□□□ -1.43
GFRA1P56159 DCAF13P3-201ENST00000561147 1334 ntBASIC6.15□□□□□ -1.43
GFRA1P56159 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
GFRA1P56159 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.15□□□□□ -1.43
GFRA1P56159 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
GFRA1P56159 AC123769.2-201ENST00000624332 5984 ntBASIC6.15□□□□□ -1.43
GFRA1P56159 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
GFRA1P56159 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GFRA1P56159 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
GFRA1P56159 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GFRA1P56159 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
GFRA1P56159 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GFRA1P56159 AC093311.1-201ENST00000506586 2021 ntBASIC6.15□□□□□ -1.43
GFRA1P56159 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.14□□□□□ -1.43
GFRA1P56159 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 ZNF806-201ENST00000438300 1774 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
GFRA1P56159 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 RNU6-500P-201ENST00000362349 107 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 Y_RNA.18-201ENST00000362461 102 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 U3.4-201ENST00000363352 213 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 RNU6-621P-201ENST00000364752 109 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 OR52E6-202ENST00000379946 954 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
GFRA1P56159 RNA5SP474-201ENST00000391234 90 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 UBBP1-201ENST00000392399 473 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 TMSB4XP8-201ENST00000402089 135 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AL136131.1-201ENST00000406079 803 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 MIR1266-201ENST00000408125 84 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.14□□□□□ -1.43
GFRA1P56159 RN7SKP222-201ENST00000410651 315 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 RNU2-16P-201ENST00000410712 136 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AL161449.1-201ENST00000414531 1199 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 TMSB4XP6-201ENST00000415187 135 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 RNGTTP1-201ENST00000420965 728 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 IPPKP1-201ENST00000422501 768 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 GAPDHP57-201ENST00000424400 585 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 TMSB4XP1-201ENST00000424567 135 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 AL050321.1-201ENST00000432363 400 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC092641.1-201ENST00000440229 772 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AL935212.3-201ENST00000450729 284 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 AP003385.3-201ENST00000472498 287 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC104685.1-201ENST00000502445 371 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC114324.2-202ENST00000503812 134 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 HSPE1P23-201ENST00000509838 286 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC022447.1-201ENST00000515358 464 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC105233.3-201ENST00000531125 744 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC140063.1-201ENST00000541343 259 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 GTF2IP8-201ENST00000560687 584 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms