Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 RNU6-532P-201ENST00000384318 107 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 RNU6-225P-201ENST00000384613 103 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NR1H2P55055 ATP5HP3-201ENST00000396994 486 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL162739.1-201ENST00000450606 307 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 RAB28P2-201ENST00000454299 641 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 OR2AF1P-201ENST00000454899 889 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 AC091874.2-201ENST00000505889 720 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 COX6B1P4-201ENST00000519826 484 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC006512.2-201ENST00000543250 486 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 AL845552.1-201ENST00000556820 323 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.68□□□□□ -1.5
NR1H2P55055 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.68□□□□□ -1.5
NR1H2P55055 SMIM12P1-201ENST00000603004 274 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 BNIP3P19-201ENST00000605397 577 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 MIR6862-1-201ENST00000613016 70 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 MIR6862-2-201ENST00000614755 70 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 uc_338.31-201ENST00000615595 186 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 FRG1DP-201ENST00000635586 771 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 AC008691.1-209ENST00000642094 814 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 TTC39DP-201ENST00000416781 1688 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.67□□□□□ -1.5
NR1H2P55055 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NR1H2P55055 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.67□□□□□ -1.5
NR1H2P55055 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.67□□□□□ -1.5
NR1H2P55055 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NR1H2P55055 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 RN7SKP185-201ENST00000362813 326 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 MIR188-201ENST00000385034 86 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 PTGES3P2-201ENST00000407942 482 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 RNA5SP198-201ENST00000410376 127 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 AC105402.1-201ENST00000413336 545 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NR1H2P55055 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 NAP1L4P2-201ENST00000425958 899 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 UBE2V1P6-201ENST00000430840 422 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 BX119904.1-201ENST00000432026 348 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 AC110602.1-201ENST00000437414 318 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 POU5F1P5-201ENST00000445059 658 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 RPL34P26-201ENST00000445636 354 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 COX4I1P2-201ENST00000447446 547 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 GAPDHP14-201ENST00000450472 937 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 HMGB1P5-202ENST00000451497 985 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 CFL1P4-201ENST00000451536 498 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 CLIC4P1-201ENST00000453177 535 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 RSU1P1-201ENST00000453416 441 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 RN7SL254P-201ENST00000460609 284 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.67□□□□□ -1.5
NR1H2P55055 RNU6-1004P-201ENST00000516584 111 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 RNA5SP230-201ENST00000517039 122 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.67□□□□□ -1.5
NR1H2P55055 HIGD1AP18-201ENST00000520730 278 ntBASIC5.67□□□□□ -1.5
NR1H2P55055 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.67□□□□□ -1.5
NR1H2P55055 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NR1H2P55055 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.67□□□□□ -1.5
NR1H2P55055 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.67□□□□□ -1.5
NR1H2P55055 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms