Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GAPDHP62-201ENST00000515313 990 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGCS2P54868 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGCS2P54868 RN7SL356P-201ENST00000582228 248 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGCS2P54868 U1.25-201ENST00000614085 162 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 U1.34-201ENST00000618578 162 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 U1.31-201ENST00000620022 160 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCS2P54868 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGCS2P54868 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGCS2P54868 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGCS2P54868 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 AC114774.1-201ENST00000507410 1770 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HMGCS2P54868 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCS2P54868 CASC19-221ENST00000641309 1382 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 INTS6P1-201ENST00000504674 2530 ntBASIC6.18□□□□□ -1.42
HMGCS2P54868 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 MAPK10-270ENST00000641102 3538 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGCS2P54868 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RPL26P29-201ENST00000415623 438 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RPL31P44-201ENST00000447680 377 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCS2P54868 TRY2P-201ENST00000448860 689 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCS2P54868 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 SNORD125-201ENST00000459538 96 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 RPL37AP8-201ENST00000494116 276 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 RN7SL591P-201ENST00000496150 292 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCS2P54868 PCNPP1-201ENST00000552501 511 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 OR11H3P-201ENST00000554547 982 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 NPM1P42-201ENST00000560329 862 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 AL353729.2-201ENST00000605859 1249 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 EIF3FP1-201ENST00000613970 806 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 AC135068.5-201ENST00000624197 983 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
HMGCS2P54868 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 AC092747.4-201ENST00000620519 1861 ntBASIC6.17□□□□□ -1.42
HMGCS2P54868 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCS2P54868 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HMGCS2P54868 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCS2P54868 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HMGCS2P54868 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HMGCS2P54868 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCS2P54868 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 CYB5AP4-201ENST00000396692 399 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGCS2P54868 EI24P4-201ENST00000423683 1078 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGCS2P54868 RPS29P22-201ENST00000472363 168 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 IGLV2-34-201ENST00000490007 283 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCS2P54868 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCS2P54868 DPPA3P2-201ENST00000553589 478 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCS2P54868 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGCS2P54868 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGCS2P54868 AC060780.2-201ENST00000589047 198 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 AC005252.1-201ENST00000604518 1063 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms