Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.5□□□□□ -1.37
NUP98P52948 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.5□□□□□ -1.37
NUP98P52948 RPL31P44-201ENST00000447680 377 ntBASIC6.5□□□□□ -1.37
NUP98P52948 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.5□□□□□ -1.37
NUP98P52948 AC005412.2-201ENST00000492004 341 ntBASIC6.5□□□□□ -1.37
NUP98P52948 IMPA1P1-201ENST00000510718 842 ntBASIC6.5□□□□□ -1.37
NUP98P52948 OR4A17P-201ENST00000526032 904 ntBASIC6.5□□□□□ -1.37
NUP98P52948 AC005000.1-201ENST00000536192 288 ntBASIC6.5□□□□□ -1.37
NUP98P52948 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.5□□□□□ -1.37
NUP98P52948 CR381572.2-201ENST00000624852 397 ntBASIC6.5□□□□□ -1.37
NUP98P52948 AC099654.6-201ENST00000636487 512 ntBASIC6.5□□□□□ -1.37
NUP98P52948 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.5□□□□□ -1.37
NUP98P52948 Z82209.2-201ENST00000623410 2012 ntBASIC6.5□□□□□ -1.37
NUP98P52948 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.5□□□□□ -1.37
NUP98P52948 AL355488.2-201ENST00000609909 2850 ntBASIC6.5□□□□□ -1.37
NUP98P52948 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 AL022323.4-201ENST00000623980 13120 ntBASIC6.5□□□□□ -1.37
NUP98P52948 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.5□□□□□ -1.37
NUP98P52948 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NUP98P52948 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.5□□□□□ -1.37
NUP98P52948 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.5□□□□□ -1.37
NUP98P52948 AC073648.4-201ENST00000442655 781 ntBASIC6.5□□□□□ -1.37
NUP98P52948 AC096741.1-201ENST00000472250 846 ntBASIC6.5□□□□□ -1.37
NUP98P52948 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.5□□□□□ -1.37
NUP98P52948 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.5□□□□□ -1.37
NUP98P52948 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.5□□□□□ -1.37
NUP98P52948 GSTP1P1-201ENST00000548078 319 ntBASIC6.5□□□□□ -1.37
NUP98P52948 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP98P52948 AC008745.1-201ENST00000604064 271 ntBASIC6.5□□□□□ -1.37
NUP98P52948 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.5□□□□□ -1.37
NUP98P52948 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
NUP98P52948 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 OR9G4-201ENST00000302957 984 ntBASIC6.49□□□□□ -1.37
NUP98P52948 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 HMGB3P7-201ENST00000400214 611 ntBASIC6.49□□□□□ -1.37
NUP98P52948 FAR2P2-201ENST00000413041 594 ntBASIC6.49□□□□□ -1.37
NUP98P52948 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP98P52948 AL590139.1-201ENST00000416267 400 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AL807761.1-201ENST00000417622 171 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP98P52948 FAR2P4-202ENST00000425399 584 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP98P52948 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP98P52948 BX323845.1-201ENST00000432417 179 ntBASIC6.49□□□□□ -1.37
NUP98P52948 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.49□□□□□ -1.37
NUP98P52948 snoU13.29-201ENST00000459370 104 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AL671862.1-201ENST00000515851 349 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP98P52948 AC104785.1-201ENST00000603220 588 ntBASIC6.49□□□□□ -1.37
NUP98P52948 AL022394.1-201ENST00000606979 292 ntBASIC6.49□□□□□ -1.37
NUP98P52948 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NUP98P52948 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP98P52948 AP004289.1-201ENST00000436307 2205 ntBASIC6.49□□□□□ -1.37
NUP98P52948 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP98P52948 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 HMGB1P32-201ENST00000425971 565 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.48□□□□□ -1.37
NUP98P52948 AC097173.1-201ENST00000505862 819 ntBASIC6.48□□□□□ -1.37
NUP98P52948 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 RN7SKP67-201ENST00000515905 235 ntBASIC6.48□□□□□ -1.37
NUP98P52948 BNIP3P1-201ENST00000547295 580 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.48□□□□□ -1.37
NUP98P52948 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.48□□□□□ -1.37
NUP98P52948 MIR4270-201ENST00000581799 70 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.48□□□□□ -1.37
NUP98P52948 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.48□□□□□ -1.37
NUP98P52948 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NUP98P52948 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
NUP98P52948 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms