Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC060766.1-201ENST00000590824 627 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM23P36406 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 MIR8080-201ENST00000622224 89 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM23P36406 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM23P36406 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM23P36406 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM23P36406 CDC27P2-201ENST00000425026 1922 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TRIM23P36406 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 MTHFD2P5-201ENST00000320415 844 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM23P36406 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM23P36406 MARK2P12-201ENST00000420129 585 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AC007161.1-204ENST00000423039 460 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM23P36406 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM23P36406 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC007386.1-201ENST00000455212 582 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC011225.1-201ENST00000457751 369 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AL133445.1-201ENST00000467051 452 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 RN7SL177P-201ENST00000476596 299 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AC105420.1-201ENST00000504389 582 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM23P36406 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 RN7SKP253-201ENST00000516424 309 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 RNU6-943P-201ENST00000516960 98 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC234775.3-201ENST00000564612 656 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AC010547.7-201ENST00000570323 333 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM23P36406 SUGT1P3-202ENST00000604259 383 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 AL118522.2-201ENST00000616045 615 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 MIR6826-201ENST00000617808 98 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM23P36406 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 AC109446.4-201ENST00000623235 2755 ntBASIC5.52□□□□□ -1.53
TRIM23P36406 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM23P36406 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM23P36406 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM23P36406 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 AC009804.1-201ENST00000400949 179 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 Z68694.1-201ENST00000413929 841 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 GTF3AP1-201ENST00000416942 1004 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 BX510359.3-201ENST00000422168 306 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 HSPE1P16-201ENST00000426640 348 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 OR6C71P-201ENST00000432580 913 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 CFL1P1-202ENST00000432948 411 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms