Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RN7SL583P-201ENST00000475692 287 ntBASIC5.34□□□□□ -1.55
RORAP35398 DUTP1-201ENST00000493631 470 ntBASIC5.34□□□□□ -1.55
RORAP35398 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.34□□□□□ -1.55
RORAP35398 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.34□□□□□ -1.55
RORAP35398 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.34□□□□□ -1.55
RORAP35398 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
RORAP35398 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.34□□□□□ -1.56
RORAP35398 AL603750.1-201ENST00000624216 1717 ntBASIC5.34□□□□□ -1.56
RORAP35398 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RORAP35398 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RORAP35398 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
RORAP35398 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RORAP35398 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.34□□□□□ -1.56
RORAP35398 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.33□□□□□ -1.56
RORAP35398 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.33□□□□□ -1.56
RORAP35398 AC235565.1-201ENST00000456962 1325 ntBASIC5.33□□□□□ -1.56
RORAP35398 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 RNA5SP91-201ENST00000390902 119 ntBASIC5.33□□□□□ -1.56
RORAP35398 RN7SKP278-201ENST00000410504 342 ntBASIC5.33□□□□□ -1.56
RORAP35398 RPS6P23-201ENST00000413224 722 ntBASIC5.33□□□□□ -1.56
RORAP35398 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.33□□□□□ -1.56
RORAP35398 AC013268.2-201ENST00000420753 337 ntBASIC5.33□□□□□ -1.56
RORAP35398 RNGTTP1-201ENST00000420965 728 ntBASIC5.33□□□□□ -1.56
RORAP35398 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 HMGN2P27-201ENST00000427352 270 ntBASIC5.33□□□□□ -1.56
RORAP35398 VDAC2P4-201ENST00000452925 711 ntBASIC5.33□□□□□ -1.56
RORAP35398 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.33□□□□□ -1.56
RORAP35398 PDCL3P4-201ENST00000489621 720 ntBASIC5.33□□□□□ -1.56
RORAP35398 RNA5SP34-201ENST00000516887 130 ntBASIC5.33□□□□□ -1.56
RORAP35398 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.33□□□□□ -1.56
RORAP35398 FKBP1AP1-201ENST00000594588 318 ntBASIC5.33□□□□□ -1.56
RORAP35398 SUGT1P3-202ENST00000604259 383 ntBASIC5.33□□□□□ -1.56
RORAP35398 AC013244.1-201ENST00000604279 193 ntBASIC5.33□□□□□ -1.56
RORAP35398 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RORAP35398 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.33□□□□□ -1.56
RORAP35398 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
RORAP35398 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
RORAP35398 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 MAPK10-338ENST00000641647 3362 ntBASIC5.32□□□□□ -1.56
RORAP35398 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
RORAP35398 RNU6-249P-201ENST00000363016 102 ntBASIC5.32□□□□□ -1.56
RORAP35398 RN7SKP28-201ENST00000364770 305 ntBASIC5.32□□□□□ -1.56
RORAP35398 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.32□□□□□ -1.56
RORAP35398 RNF10P1-201ENST00000418589 369 ntBASIC5.32□□□□□ -1.56
RORAP35398 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 BRWD1P3-201ENST00000428816 390 ntBASIC5.32□□□□□ -1.56
RORAP35398 RPSAP41-201ENST00000439695 860 ntBASIC5.32□□□□□ -1.56
RORAP35398 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 UBA52P7-201ENST00000486088 380 ntBASIC5.32□□□□□ -1.56
RORAP35398 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.32□□□□□ -1.56
RORAP35398 IGLV3-24-201ENST00000517477 197 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms