Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SAA3P-201ENST00000533267 365 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC005832.3-201ENST00000537929 631 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 RPL3P13-201ENST00000550415 216 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC090888.3-201ENST00000558917 509 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 MTATP6P3-201ENST00000581686 676 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 MIR3611-201ENST00000584484 83 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC010327.2-201ENST00000587647 488 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC12P31275 EIF1P6-201ENST00000600054 334 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 NTAN1P1-201ENST00000603150 646 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 BUB1P1-201ENST00000603541 607 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC090525.3-201ENST00000605601 189 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC211486.4-201ENST00000621495 113 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC009878.1-201ENST00000621819 340 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AL356585.10-201ENST00000641883 123 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 AC007842.1-201ENST00000597336 2039 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC011477.1-204ENST00000623416 1325 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 NF1P8-201ENST00000415351 1461 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 AC096656.1-201ENST00000623826 1364 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 RN7SKP254-201ENST00000410685 310 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 PTP4A1P1-201ENST00000420539 515 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC12P31275 MTCO1P54-201ENST00000430139 712 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 RPEP4-201ENST00000437636 602 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 SDHCP3-201ENST00000445371 506 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC12P31275 AL096803.1-201ENST00000456921 1021 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC091982.1-202ENST00000473923 343 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC091544.1-201ENST00000484702 348 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AL024509.2-201ENST00000493462 493 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC12P31275 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 ARL4AP1-201ENST00000503220 705 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 DYNLL1P6-201ENST00000503440 264 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC12P31275 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC055733.3-201ENST00000505214 523 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 RNU6-416P-201ENST00000516265 103 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 IGJP1-201ENST00000522682 475 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 OR9L1P-201ENST00000529493 933 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 AP002812.4-201ENST00000532139 286 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC008083.2-201ENST00000546707 476 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC12P31275 POLR2KP1-201ENST00000553226 168 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC011260.1-201ENST00000578420 472 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC12P31275 AC022146.1-201ENST00000595307 847 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC12P31275 AL589765.6-201ENST00000601909 549 ntBASIC6.24□□□□□ -1.41
HOXC12P31275 AC092032.1-201ENST00000603090 165 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms