Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF4P23510 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TNFSF4P23510 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
TNFSF4P23510 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF4P23510 PARP4P2-201ENST00000446672 3326 ntBASIC5.54□□□□□ -1.52
TNFSF4P23510 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF4P23510 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF4P23510 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF4P23510 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFSF4P23510 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFSF4P23510 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC009120.2-204ENST00000621548 2032 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 Z95114.1-201ENST00000624264 14574 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 RNU1-84P-201ENST00000365447 164 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL021331.1-201ENST00000402817 582 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 RN7SKP146-201ENST00000410242 334 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 RPL23AP85-201ENST00000421838 433 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC097721.1-201ENST00000427150 1253 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 RPL12P49-201ENST00000441100 121 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 MTCYBP42-201ENST00000444653 1130 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL020997.1-201ENST00000446554 349 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC073476.1-201ENST00000452854 407 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 RPL10P17-201ENST00000453852 316 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC092155.2-201ENST00000454675 477 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC099670.1-201ENST00000455141 783 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 BX248409.1-201ENST00000455497 255 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 RPS7P10-201ENST00000464254 603 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 RPL23AP71-201ENST00000470966 469 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 OR7E22P-201ENST00000478335 1035 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC044810.1-201ENST00000480271 711 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 PPP1R11P1-201ENST00000486095 376 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 H3F3AP3-201ENST00000497682 407 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC106800.3-201ENST00000511389 308 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 OR5H7P-201ENST00000514084 930 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 HMGB1P23-201ENST00000518743 568 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 COX6B1P6-201ENST00000522347 255 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 YWHABP2-201ENST00000540201 713 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 MIR3157-201ENST00000578688 85 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC243654.2-201ENST00000612843 443 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL109659.3-201ENST00000624985 950 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 CDRT1-208ENST00000630868 794 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFSF4P23510 AC111188.2-201ENST00000529697 1387 ntBASIC5.53□□□□□ -1.52
TNFSF4P23510 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFSF4P23510 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
TNFSF4P23510 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFSF4P23510 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TNFSF4P23510 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFSF4P23510 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFSF4P23510 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF4P23510 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF4P23510 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF4P23510 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF4P23510 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TNFSF4P23510 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFSF4P23510 AC019072.1-201ENST00000604535 1551 ntBASIC5.52□□□□□ -1.53
TNFSF4P23510 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms