Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 GAPDHP58-201ENST00000438477 1006 ntBASIC4.77□□□□□ -1.65
USF1P22415 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.77□□□□□ -1.65
USF1P22415 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.77□□□□□ -1.65
USF1P22415 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 OR7E116P-201ENST00000448529 957 ntBASIC4.77□□□□□ -1.65
USF1P22415 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 RSU1P1-201ENST00000453416 441 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.77□□□□□ -1.65
USF1P22415 COX6B1P2-201ENST00000489624 230 ntBASIC4.77□□□□□ -1.65
USF1P22415 ST13P12-201ENST00000508958 1094 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 RNA5SP92-201ENST00000516437 110 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC139365.2-201ENST00000517972 253 ntBASIC4.77□□□□□ -1.65
USF1P22415 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.77□□□□□ -1.65
USF1P22415 AC090424.1-201ENST00000535243 736 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.77□□□□□ -1.65
USF1P22415 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.77□□□□□ -1.65
USF1P22415 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.77□□□□□ -1.65
USF1P22415 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.77□□□□□ -1.65
USF1P22415 MRPS21P7-201ENST00000566937 238 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC060780.2-201ENST00000589047 198 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 BNIP3P32-201ENST00000600015 554 ntBASIC4.77□□□□□ -1.65
USF1P22415 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 SUGT1P3-202ENST00000604259 383 ntBASIC4.77□□□□□ -1.65
USF1P22415 AL512329.2-201ENST00000607350 548 ntBASIC4.77□□□□□ -1.65
USF1P22415 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
USF1P22415 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.77□□□□□ -1.65
USF1P22415 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.76□□□□□ -1.65
USF1P22415 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
USF1P22415 RNA5SP453-201ENST00000362503 119 ntBASIC4.76□□□□□ -1.65
USF1P22415 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
USF1P22415 SMC4P1-201ENST00000414479 527 ntBASIC4.76□□□□□ -1.65
USF1P22415 GNG5P5-201ENST00000420444 220 ntBASIC4.76□□□□□ -1.65
USF1P22415 NANOGP4-201ENST00000427230 913 ntBASIC4.76□□□□□ -1.65
USF1P22415 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.76□□□□□ -1.65
USF1P22415 AC096775.1-201ENST00000437724 448 ntBASIC4.76□□□□□ -1.65
USF1P22415 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.76□□□□□ -1.65
USF1P22415 AC015983.1-201ENST00000441577 373 ntBASIC4.76□□□□□ -1.65
USF1P22415 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.76□□□□□ -1.65
USF1P22415 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 RPL38P3-201ENST00000484463 213 ntBASIC4.76□□□□□ -1.65
USF1P22415 PDCL3P4-201ENST00000489621 720 ntBASIC4.76□□□□□ -1.65
USF1P22415 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.76□□□□□ -1.65
USF1P22415 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.76□□□□□ -1.65
USF1P22415 CDC42P3-201ENST00000518493 633 ntBASIC4.76□□□□□ -1.65
USF1P22415 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.76□□□□□ -1.65
USF1P22415 HAUS8P1-201ENST00000549005 542 ntBASIC4.76□□□□□ -1.65
USF1P22415 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.76□□□□□ -1.65
USF1P22415 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 AC073429.2-201ENST00000569694 1444 ntBASIC4.76□□□□□ -1.65
USF1P22415 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.76□□□□□ -1.65
USF1P22415 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.76□□□□□ -1.65
USF1P22415 AC006363.1-201ENST00000603806 463 ntBASIC4.76□□□□□ -1.65
USF1P22415 AL359513.1-201ENST00000614364 557 ntBASIC4.76□□□□□ -1.65
USF1P22415 AP003072.5-201ENST00000623872 773 ntBASIC4.76□□□□□ -1.65
USF1P22415 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 CASC19-222ENST00000641321 1173 ntBASIC4.76□□□□□ -1.65
USF1P22415 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 AC138907.8-201ENST00000623981 2256 ntBASIC4.76□□□□□ -1.65
USF1P22415 DDX18P6-201ENST00000450119 1997 ntBASIC4.76□□□□□ -1.65
USF1P22415 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USF1P22415 PABPC1P6-201ENST00000445594 1829 ntBASIC4.76□□□□□ -1.65
USF1P22415 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USF1P22415 AP004607.3-201ENST00000530354 3915 ntBASIC4.76□□□□□ -1.65
USF1P22415 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.76□□□□□ -1.65
USF1P22415 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 AC109780.1-201ENST00000451768 1344 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms