Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 CXADRP1-201ENST00000398098 1095 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC099535.1-201ENST00000408928 371 ntBASIC5.13□□□□□ -1.59
SDC1P18827 OR2AT2P-201ENST00000413438 905 ntBASIC5.13□□□□□ -1.59
SDC1P18827 OR6E1P-201ENST00000414424 923 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.13□□□□□ -1.59
SDC1P18827 RPS3P2-201ENST00000421346 701 ntBASIC5.13□□□□□ -1.59
SDC1P18827 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 AC090018.1-201ENST00000434369 367 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 CYCSP51-201ENST00000443545 318 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 DEFB109A-201ENST00000482450 265 ntBASIC5.13□□□□□ -1.59
SDC1P18827 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 PFN1P8-201ENST00000497012 543 ntBASIC5.13□□□□□ -1.59
SDC1P18827 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.13□□□□□ -1.59
SDC1P18827 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.13□□□□□ -1.59
SDC1P18827 AC027369.5-201ENST00000533838 755 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AP004607.2-201ENST00000533949 322 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.13□□□□□ -1.59
SDC1P18827 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.13□□□□□ -1.59
SDC1P18827 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 AC135626.1-201ENST00000556983 435 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.13□□□□□ -1.59
SDC1P18827 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.13□□□□□ -1.59
SDC1P18827 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 AC019322.1-201ENST00000571869 389 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC023389.2-201ENST00000580031 955 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC010487.1-201ENST00000594408 1172 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC009027.1-201ENST00000604510 479 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 NF1P10-201ENST00000613227 742 ntBASIC5.13□□□□□ -1.59
SDC1P18827 CXADRP3-202ENST00000617265 1100 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC109583.2-201ENST00000617367 129 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC091932.2-201ENST00000623014 291 ntBASIC5.13□□□□□ -1.59
SDC1P18827 CU639417.4-201ENST00000623928 207 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC007683.2-201ENST00000624681 714 ntBASIC5.13□□□□□ -1.59
SDC1P18827 AC004158.1-201ENST00000564508 4319 ntBASIC5.13□□□□□ -1.59
SDC1P18827 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SDC1P18827 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SDC1P18827 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 AC012078.1-201ENST00000405035 1646 ntBASIC5.12□□□□□ -1.59
SDC1P18827 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 OR9G4-201ENST00000302957 984 ntBASIC5.12□□□□□ -1.59
SDC1P18827 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 RNU1-19P-201ENST00000363306 165 ntBASIC5.12□□□□□ -1.59
SDC1P18827 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
SDC1P18827 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 SRSF1P1-201ENST00000424058 520 ntBASIC5.12□□□□□ -1.59
SDC1P18827 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.12□□□□□ -1.59
SDC1P18827 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AP002371.1-201ENST00000463604 433 ntBASIC5.12□□□□□ -1.59
SDC1P18827 NDUFA5P5-201ENST00000468361 342 ntBASIC5.12□□□□□ -1.59
SDC1P18827 AC135999.1-201ENST00000478962 479 ntBASIC5.12□□□□□ -1.59
SDC1P18827 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 AP000926.3-201ENST00000497201 299 ntBASIC5.12□□□□□ -1.59
SDC1P18827 RPS24P16-201ENST00000497294 392 ntBASIC5.12□□□□□ -1.59
SDC1P18827 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 EIF3KP3-201ENST00000514461 639 ntBASIC5.12□□□□□ -1.59
SDC1P18827 SCARNA16.4-201ENST00000516956 187 ntBASIC5.12□□□□□ -1.59
SDC1P18827 RNA5SP230-201ENST00000517039 122 ntBASIC5.12□□□□□ -1.59
SDC1P18827 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
SDC1P18827 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AC010547.6-201ENST00000571789 193 ntBASIC5.12□□□□□ -1.59
SDC1P18827 MIR4660-201ENST00000583549 74 ntBASIC5.12□□□□□ -1.59
SDC1P18827 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 PRPF19P1-201ENST00000584766 898 ntBASIC5.12□□□□□ -1.59
SDC1P18827 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.12□□□□□ -1.59
SDC1P18827 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
SDC1P18827 AC132068.1-201ENST00000623805 459 ntBASIC5.12□□□□□ -1.59
SDC1P18827 FRG1EP-201ENST00000634469 770 ntBASIC5.12□□□□□ -1.59
SDC1P18827 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 AC005261.6-201ENST00000623072 1387 ntBASIC5.12□□□□□ -1.59
SDC1P18827 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.12□□□□□ -1.59
SDC1P18827 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SDC1P18827 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms