Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 RN7SKP185-201ENST00000362813 326 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.97□□□□□ -1.45
COL11A1P12107 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.97□□□□□ -1.45
COL11A1P12107 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 HMGN1P9-201ENST00000515212 298 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 SEPT10P1-201ENST00000517342 1162 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 SUMO2P19-201ENST00000518920 295 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 MIR3934-201ENST00000579806 107 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.97□□□□□ -1.45
COL11A1P12107 AC098935.2-201ENST00000604222 466 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 MIR6133-201ENST00000617057 108 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AC069542.2-201ENST00000624816 216 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.97□□□□□ -1.45
COL11A1P12107 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL11A1P12107 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL11A1P12107 RPL26P29-201ENST00000415623 438 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 MED28P3-201ENST00000444288 531 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 AL354714.3-201ENST00000447284 493 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AL672167.3-201ENST00000465951 960 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 GLUD1P3-202ENST00000508551 200 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 OR51A1P-201ENST00000511110 946 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 OR7H2P-201ENST00000513483 306 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.97□□□□□ -1.45
COL11A1P12107 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.97□□□□□ -1.45
COL11A1P12107 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.97□□□□□ -1.45
COL11A1P12107 AL031320.1-201ENST00000604177 357 ntBASIC5.97□□□□□ -1.45
COL11A1P12107 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.97□□□□□ -1.45
COL11A1P12107 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.97□□□□□ -1.45
COL11A1P12107 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL11A1P12107 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.96□□□□□ -1.45
COL11A1P12107 BX284613.1-201ENST00000452221 1641 ntBASIC5.96□□□□□ -1.45
COL11A1P12107 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL11A1P12107 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL11A1P12107 AC138907.8-201ENST00000623981 2256 ntBASIC5.96□□□□□ -1.45
COL11A1P12107 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL11A1P12107 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL11A1P12107 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.96□□□□□ -1.46
COL11A1P12107 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL11A1P12107 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL11A1P12107 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.96□□□□□ -1.46
COL11A1P12107 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL11A1P12107 GAPDHP15-201ENST00000398586 975 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 AL133482.1-201ENST00000415988 498 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL11A1P12107 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 AC124944.2-201ENST00000429866 1242 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.96□□□□□ -1.46
COL11A1P12107 VDAC1P6-201ENST00000430062 855 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.96□□□□□ -1.46
COL11A1P12107 snoU13.29-201ENST00000459370 104 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 AC005412.2-201ENST00000492004 341 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.96□□□□□ -1.46
COL11A1P12107 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.96□□□□□ -1.46
COL11A1P12107 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.96□□□□□ -1.46
COL11A1P12107 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.96□□□□□ -1.46
COL11A1P12107 MIR4697-201ENST00000582977 78 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 PRELID3BP3-201ENST00000584963 545 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.96□□□□□ -1.46
COL11A1P12107 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.96□□□□□ -1.46
COL11A1P12107 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.96□□□□□ -1.46
COL11A1P12107 AC034229.2-201ENST00000566945 2508 ntBASIC5.96□□□□□ -1.46
COL11A1P12107 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL11A1P12107 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL11A1P12107 EPS15P1-202ENST00000459691 2071 ntBASIC5.95□□□□□ -1.46
COL11A1P12107 RN7SKP145-201ENST00000363291 303 ntBASIC5.95□□□□□ -1.46
COL11A1P12107 AC068138.1-201ENST00000412635 217 ntBASIC5.95□□□□□ -1.46
COL11A1P12107 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.95□□□□□ -1.46
COL11A1P12107 NDUFA5P8-201ENST00000449019 346 ntBASIC5.95□□□□□ -1.46
COL11A1P12107 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.95□□□□□ -1.46
COL11A1P12107 RN7SL738P-201ENST00000470264 297 ntBASIC5.95□□□□□ -1.46
COL11A1P12107 RPS29P22-201ENST00000472363 168 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms