Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHGAP10645 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 ST5-237ENST00000530991 3396 ntTSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 FANCD2P2-201ENST00000437591 1400 ntBASIC10.26□□□□□ -0.77
CHGAP10645 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 AL512662.1-201ENST00000624850 2251 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AL121835.2-201ENST00000624253 3502 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AC012213.2-201ENST00000562917 4597 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AP003175.1-201ENST00000641383 6658 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AC138627.1-203ENST00000641872 1680 ntBASIC10.26□□□□□ -0.77
CHGAP10645 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 DNAJA1P3-201ENST00000399417 1194 ntBASIC10.26□□□□□ -0.77
CHGAP10645 SPATA20P1-201ENST00000423089 438 ntBASIC10.26□□□□□ -0.77
CHGAP10645 OFD1P12Y-201ENST00000427963 1207 ntBASIC10.26□□□□□ -0.77
CHGAP10645 BLOC1S2P1-201ENST00000428431 301 ntBASIC10.26□□□□□ -0.77
CHGAP10645 TIMM9P3-201ENST00000428659 274 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AC018804.1-201ENST00000430381 618 ntBASIC10.26□□□□□ -0.77
CHGAP10645 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC10.26□□□□□ -0.77
CHGAP10645 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC10.26□□□□□ -0.77
CHGAP10645 OR7E125P-201ENST00000443450 846 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 SNORA81.1-201ENST00000458922 177 ntBASIC10.26□□□□□ -0.77
CHGAP10645 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 RN7SL180P-201ENST00000466769 294 ntBASIC10.26□□□□□ -0.77
CHGAP10645 RN7SL83P-201ENST00000468131 297 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AC013828.1-201ENST00000481845 158 ntBASIC10.26□□□□□ -0.77
CHGAP10645 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHGAP10645 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CHGAP10645 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC10.26□□□□□ -0.77
CHGAP10645 RPL7L1P4-201ENST00000513004 707 ntBASIC10.26□□□□□ -0.77
CHGAP10645 MTCO1P35-201ENST00000515270 228 ntBASIC10.26□□□□□ -0.77
CHGAP10645 IGLC4-201ENST00000517690 248 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC10.26□□□□□ -0.77
CHGAP10645 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC10.26□□□□□ -0.77
CHGAP10645 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC10.26□□□□□ -0.77
CHGAP10645 AC008752.3-201ENST00000588113 712 ntBASIC10.26□□□□□ -0.77
CHGAP10645 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC10.26□□□□□ -0.77
CHGAP10645 FRG1KP-201ENST00000623592 341 ntBASIC10.26□□□□□ -0.77
CHGAP10645 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
CHGAP10645 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC10.26□□□□□ -0.77
CHGAP10645 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CHGAP10645 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC10.26□□□□□ -0.77
CHGAP10645 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CHGAP10645 RNA5SP382-201ENST00000363355 112 ntBASIC10.25□□□□□ -0.77
CHGAP10645 Y_RNA.263-201ENST00000364659 114 ntBASIC10.25□□□□□ -0.77
CHGAP10645 RN7SKP130-201ENST00000364924 301 ntBASIC10.25□□□□□ -0.77
CHGAP10645 RN7SKP189-201ENST00000365042 330 ntBASIC10.25□□□□□ -0.77
CHGAP10645 RN7SKP187-201ENST00000365536 330 ntBASIC10.25□□□□□ -0.77
CHGAP10645 RNU6-297P-201ENST00000384636 107 ntBASIC10.25□□□□□ -0.77
CHGAP10645 RN7SKP254-201ENST00000410685 310 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC10.25□□□□□ -0.77
CHGAP10645 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC10.25□□□□□ -0.77
CHGAP10645 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 RPS18P1-201ENST00000447840 458 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 RPS20P24-201ENST00000457473 361 ntBASIC10.25□□□□□ -0.77
CHGAP10645 ARPC3P2-201ENST00000457786 533 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC10.25□□□□□ -0.77
CHGAP10645 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 RN7SL143P-201ENST00000496780 297 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 PGAM4P2-201ENST00000512491 721 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AP005902.2-201ENST00000518393 307 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC10.25□□□□□ -0.77
CHGAP10645 RPL10P18-201ENST00000519384 309 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC107958.1-201ENST00000556576 290 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AP001004.1-201ENST00000582468 324 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC10.25□□□□□ -0.77
CHGAP10645 AC233280.2-201ENST00000603917 1070 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC011472.4-201ENST00000615848 491 ntBASIC10.25□□□□□ -0.77
CHGAP10645 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC10.25□□□□□ -0.77
CHGAP10645 AC073348.1-201ENST00000623002 331 ntBASIC10.25□□□□□ -0.77
CHGAP10645 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC10.25□□□□□ -0.77
CHGAP10645 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CHGAP10645 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CHGAP10645 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC10.25□□□□□ -0.77
CHGAP10645 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHGAP10645 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHGAP10645 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHGAP10645 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms