Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC095038.1-201ENST00000429248 1591 ntBASIC6.95□□□□□ -1.3
PDGFAP04085 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.95□□□□□ -1.3
PDGFAP04085 AC104083.1-201ENST00000569449 2615 ntBASIC6.95□□□□□ -1.3
PDGFAP04085 AC119674.1-213ENST00000641177 1386 ntBASIC6.95□□□□□ -1.3
PDGFAP04085 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PDGFAP04085 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL031651.1-201ENST00000615357 1438 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 SPATA31C1-201ENST00000420021 3895 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PDGFAP04085 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 RBMX2P2-201ENST00000257020 946 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 IGKV7-3-201ENST00000357453 298 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 RNU6-492P-201ENST00000363035 104 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 RNU6-723P-201ENST00000383973 107 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PDGFAP04085 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.94□□□□□ -1.3
PDGFAP04085 MTCYBP24-201ENST00000420387 1106 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC245054.1-201ENST00000420944 258 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 RPL35P8-201ENST00000433284 337 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 MTND4LP10-201ENST00000435146 291 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AL604028.2-201ENST00000437848 788 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 MTCO1P48-201ENST00000448024 1096 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC009244.1-201ENST00000450566 258 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 OR52E7P-201ENST00000452394 933 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC025271.1-201ENST00000485045 429 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 RPL5P33-201ENST00000487833 905 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL035404.1-201ENST00000497982 568 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC095059.2-201ENST00000510601 933 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC010342.1-201ENST00000514047 877 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 RNU6-885P-201ENST00000516607 104 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC107952.1-201ENST00000524200 376 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 OR8Q1P-201ENST00000526467 655 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 SLC2A13P1-201ENST00000531560 322 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC004217.3-201ENST00000551552 878 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AC136618.2-201ENST00000575091 400 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC061975.3-201ENST00000583209 244 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.94□□□□□ -1.3
PDGFAP04085 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AP000894.4-201ENST00000610185 483 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL121782.1-201ENST00000611242 413 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 Y_RNA.804-201ENST00000615262 101 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC027807.2-201ENST00000616099 408 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL158209.2-201ENST00000619266 216 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 AC114546.4-201ENST00000624413 369 ntBASIC6.94□□□□□ -1.3
PDGFAP04085 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
PDGFAP04085 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDGFAP04085 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.94□□□□□ -1.3
PDGFAP04085 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
PDGFAP04085 AL031985.3-201ENST00000565390 2449 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.93□□□□□ -1.3
PDGFAP04085 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 RBPJP6-201ENST00000411556 1431 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PDGFAP04085 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.93□□□□□ -1.3
PDGFAP04085 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDGFAP04085 RNU5E-5P-201ENST00000365379 116 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 Y_RNA.453-201ENST00000384223 109 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RNU6-297P-201ENST00000384636 107 ntBASIC6.93□□□□□ -1.3
PDGFAP04085 RNA5SP23-201ENST00000391006 105 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms