Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 TTC39DP-201ENST00000416781 1688 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 NXF4-202ENST00000416098 1465 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC092451.3-201ENST00000625067 1343 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 AL133268.1-201ENST00000405676 1401 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC092104.1-201ENST00000497346 1441 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CNOT4O95628 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CNOT4O95628 RNU1-24P-201ENST00000364285 165 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 U6.112-201ENST00000384129 70 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 RNA5SP474-201ENST00000391234 90 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 UBBP1-201ENST00000392399 473 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AL590084.1-201ENST00000407885 387 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AL663061.1-201ENST00000416625 580 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC019178.2-201ENST00000423595 505 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC124944.2-201ENST00000429866 1242 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC129850.1-201ENST00000436203 508 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.03□□□□□ -1.44
CNOT4O95628 RN7SKP198-201ENST00000459286 306 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 SYPL1P1-201ENST00000473622 768 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 RPL5P11-201ENST00000498068 893 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 RNA5SP473-201ENST00000516402 125 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 RNU6-759P-201ENST00000516740 103 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC116917.1-201ENST00000520558 305 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 AL591767.3-201ENST00000554632 525 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 PPIAP6-201ENST00000557078 499 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 ACTR3BP3-201ENST00000565577 979 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC002400.1-201ENST00000569310 726 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 SNORA70D-201ENST00000578836 135 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 RN7SL270P-201ENST00000579643 281 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.03□□□□□ -1.44
CNOT4O95628 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.03□□□□□ -1.44
CNOT4O95628 VN1R88P-201ENST00000596787 292 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AL390877.1-201ENST00000605704 214 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AL357078.3-201ENST00000607528 618 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AL513477.2-201ENST00000607858 568 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC092794.1-201ENST00000612734 582 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC018755.4-201ENST00000619715 454 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CNOT4O95628 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CNOT4O95628 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 AP002800.1-201ENST00000624982 2225 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 PPBPP2-201ENST00000513150 1362 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 AC079298.1-201ENST00000625026 1619 ntBASIC6.03□□□□□ -1.44
CNOT4O95628 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.03□□□□□ -1.44
CNOT4O95628 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNOT4O95628 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms