Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC005077.1-201ENST00000449226 375 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC098826.2-201ENST00000452011 651 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 CALM1P2-201ENST00000452941 448 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC008410.1-201ENST00000483777 339 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC091544.1-201ENST00000484702 348 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 OR56A7P-201ENST00000524865 941 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 MTND5P21-201ENST00000531961 522 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 MIR4433B-201ENST00000581329 102 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM38O00635 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL136228.1-201ENST00000622221 319 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC008993.2-201ENST00000631744 806 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM38O00635 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM38O00635 AL355834.1-201ENST00000556602 3965 ntBASIC6.03□□□□□ -1.44
TRIM38O00635 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM38O00635 Z95114.1-201ENST00000624264 14574 ntBASIC6.02□□□□□ -1.44
TRIM38O00635 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 SNORD1C-201ENST00000363315 78 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 RN7SKP292-201ENST00000365522 317 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AL035405.1-201ENST00000400795 710 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 RN7SKP17-201ENST00000411242 351 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM38O00635 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 RPL35AP31-201ENST00000418340 337 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC092570.3-201ENST00000420113 693 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 OR5W1P-201ENST00000423705 938 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC093716.1-201ENST00000435923 377 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC015983.1-201ENST00000441577 373 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC023512.1-201ENST00000444513 499 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 FTLP8-201ENST00000446770 267 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 VPS25P1-201ENST00000455691 508 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 RN7SL205P-201ENST00000490174 284 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC093815.1-201ENST00000508637 280 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 CYP4F27P-201ENST00000514557 494 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 RN7SKP253-201ENST00000516424 309 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 HMGN2P47-201ENST00000559378 272 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 NPM1P42-201ENST00000560329 862 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC023158.1-201ENST00000561632 1025 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC084373.1-201ENST00000603311 235 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 BNIP3P31-201ENST00000604515 566 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC004890.3-201ENST00000605566 1095 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC097065.2-201ENST00000608159 533 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 MIR6768-201ENST00000610734 72 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AP000770.2-201ENST00000623694 100 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM38O00635 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TRIM38O00635 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM38O00635 PROS2P-201ENST00000474651 1951 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM38O00635 AC011416.1-201ENST00000514947 1732 ntBASIC6.02□□□□□ -1.45
TRIM38O00635 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM38O00635 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM38O00635 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM38O00635 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM38O00635 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM38O00635 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms