Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC006213.6-201ENST00000623722 4179 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL359091.1-201ENST00000449048 1734 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 RN7SKP160-201ENST00000363804 340 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC106883.1-201ENST00000418805 562 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AK4P4-201ENST00000419465 646 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 PTP4A1P1-201ENST00000420539 515 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 DSTNP5-201ENST00000427921 523 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC002504.1-201ENST00000438281 691 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL096829.2-201ENST00000446582 742 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 RN7SL466P-201ENST00000497546 295 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 SUMO1P1-201ENST00000497904 306 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 PPM1AP1-201ENST00000502740 1135 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 NENFP3-201ENST00000503735 313 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC109481.1-201ENST00000509173 282 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 IGKV2-18-201ENST00000522607 343 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC073916.1-201ENST00000545095 130 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC006530.1-201ENST00000555980 571 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 HMGN2P47-201ENST00000559378 272 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 DHFRP1-201ENST00000579682 559 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 MIR1273E-201ENST00000581165 102 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC067852.5-201ENST00000589299 310 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC079880.2-201ENST00000603790 1213 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC104695.2-201ENST00000605056 775 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AP005229.2-201ENST00000609980 697 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AL021918.2-201ENST00000613415 194 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC024255.1-201ENST00000614376 102 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC132825.1-201ENST00000463573 2247 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC106754.1-201ENST00000562632 1513 ntBASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC187A0A096LP49 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 ZNF90P1-201ENST00000480493 1951 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 RNA5SP132-201ENST00000364725 118 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 VN1R51P-201ENST00000411675 945 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 TATDN1P1-201ENST00000414123 891 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 OR13Z1P-201ENST00000416141 834 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 CYP4F30P-202ENST00000420048 405 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 NME1P1-201ENST00000420914 382 ntBASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC187A0A096LP49 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms