Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SUGT1P1-201ENST00000379514 476 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MIR27A-201ENST00000385073 78 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AL589647.1-201ENST00000402485 466 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SKP30-201ENST00000411373 334 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC092042.2-201ENST00000417304 331 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 GAPDHP17-201ENST00000449858 1001 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 FABP3P2-201ENST00000453169 399 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 RPL18AP17-201ENST00000455326 198 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL36P-201ENST00000469345 276 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 ACTR3P3-201ENST00000480448 893 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC084871.2-201ENST00000503355 464 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 KCTD9P2-201ENST00000512203 1013 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC117383.2-201ENST00000514722 322 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SLC2A13P1-201ENST00000531560 322 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AP004833.3-201ENST00000531893 322 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 COX6CP11-201ENST00000555293 229 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 PRR13P5-201ENST00000596581 442 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SNX29P2-204ENST00000603801 875 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC112187.2-201ENST00000604345 283 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MIR7162-201ENST00000611134 69 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MIR6883-201ENST00000614952 78 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MAPK10-281ENST00000641170 3070 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MAPK10-290ENST00000641237 2826 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC008555.1-201ENST00000561778 2757 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 HYDIN2-203ENST00000614586 13885 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 MFSD8-227ENST00000641393 4069 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC090229.1-201ENST00000590983 1609 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC245505.2-201ENST00000553572 3055 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 FRG1BP-201ENST00000278882 761 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 Y_RNA.1-201ENST00000352915 104 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 FRG1CP-201ENST00000358464 769 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RNU4-79P-201ENST00000362764 141 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 Y_RNA.409-201ENST00000383990 98 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-1103P-201ENST00000384150 107 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-878P-201ENST00000384578 110 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RPSAP72-201ENST00000407020 358 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SKP232-201ENST00000410170 290 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SKP207-201ENST00000411204 303 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC004690.1-201ENST00000418216 328 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC127526.2-201ENST00000426436 775 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 GAPDHP51-201ENST00000426454 1000 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 CALM1P1-201ENST00000442082 433 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL591379.2-201ENST00000450223 397 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 SNRPGP6-201ENST00000451124 220 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL335P-201ENST00000482790 304 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC079768.1-201ENST00000503181 711 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms