Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AL136520.1-201ENST00000600311 1322 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 RNU4-34P-201ENST00000410431 124 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 RPL23AP4-201ENST00000427757 463 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 TRIM60P16-201ENST00000444048 694 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 SYT14P1-201ENST00000481459 721 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC092824.1-201ENST00000483524 576 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC116562.1-201ENST00000485355 781 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 NDUFA5P12-201ENST00000503796 343 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 OR56A7P-201ENST00000524865 941 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC025918.2-201ENST00000558683 763 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC007494.1-201ENST00000562293 760 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC015802.2-201ENST00000589690 189 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 MTATP6P2-201ENST00000603319 678 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC093388.1-201ENST00000609166 430 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 MIR6748-201ENST00000610433 71 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AP000943.4-201ENST00000622912 357 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 AL132640.3-201ENST00000630473 177 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 FRG1DP-201ENST00000635586 771 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.15□□□□□ -1.11
USP35Q9P2H5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
USP35Q9P2H5 AC024651.2-201ENST00000562480 2098 ntBASIC8.15□□□□□ -1.11
USP35Q9P2H5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
USP35Q9P2H5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC024587.1-201ENST00000505925 2157 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 MTCO1P4-201ENST00000520516 1409 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC235565.1-201ENST00000456962 1325 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 RNU6-1176P-201ENST00000390955 107 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC104297.1-201ENST00000393779 870 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 CHMP1B2P-201ENST00000399581 597 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 AL096829.1-201ENST00000413677 457 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC107015.1-201ENST00000466902 747 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 UBA52P7-201ENST00000486088 380 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC092902.1-201ENST00000486999 259 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 RPS23P1-201ENST00000491662 432 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 IGLV3-6-201ENST00000523937 250 ntBASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.14□□□□□ -1.11
USP35Q9P2H5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USP35Q9P2H5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC117409.1-201ENST00000470499 1310 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 SNORA63.3-201ENST00000362682 132 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 OR7E101P-201ENST00000400428 513 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USP35Q9P2H5 CYCSP52-201ENST00000422857 310 ntBASIC8.13□□□□□ -1.11
USP35Q9P2H5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.13□□□□□ -1.11
USP35Q9P2H5 AL139415.1-201ENST00000424862 352 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms