Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HCFC1R1Q9NWW0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 RNA5SP514-201ENST00000363717 111 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AL360271.1-201ENST00000395679 510 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AP002345.1-201ENST00000456493 928 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AL355032.1-201ENST00000472981 438 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 RN7SL222P-201ENST00000476452 299 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 OR4A46P-201ENST00000527255 933 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AC126177.5-201ENST00000549599 178 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AC007342.5-201ENST00000571340 2142 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AL683813.2-201ENST00000605245 502 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 RPSAP73-201ENST00000614820 330 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 CASC19-222ENST00000641321 1173 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 MSL3P1-202ENST00000440028 1468 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HCFC1R1Q9NWW0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC005224.3-201ENST00000584683 2140 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC022164.1-201ENST00000568767 2673 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AL445687.2-201ENST00000458156 728 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 RPS21P4-201ENST00000487122 248 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 RPEP1-201ENST00000504507 658 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC108157.1-201ENST00000510511 539 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AL049779.2-201ENST00000553847 315 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 MIMT1-201ENST00000597105 1050 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC025574.2-201ENST00000615621 514 ntBASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.87□□□□□ -1.47
HCFC1R1Q9NWW0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCFC1R1Q9NWW0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms