Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 OR9G4-201ENST00000302957 984 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 OR1L6-202ENST00000373684 1044 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AL031985.1-201ENST00000392713 418 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 MIR1282-201ENST00000408865 101 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 VN1R3-201ENST00000418822 919 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC012075.1-201ENST00000436549 580 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 RPL31P15-201ENST00000449770 338 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 RN7SL273P-201ENST00000481561 299 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 TMEM97P2-201ENST00000517841 403 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 BLZF2P-201ENST00000553776 1130 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC090888.3-201ENST00000558917 509 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC005341.1-201ENST00000571086 708 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC009027.1-201ENST00000604510 479 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AP005432.1-201ENST00000580891 3485 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 TMSB4XP4-201ENST00000323496 618 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 RNU1-19P-201ENST00000363306 165 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AL133388.1-201ENST00000404509 287 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 RN7SKP286-201ENST00000410894 299 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AL161636.2-201ENST00000445179 927 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 GAPDHP14-201ENST00000450472 937 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC093827.1-201ENST00000480094 861 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 EIF1P7-201ENST00000487533 337 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 RN7SKP99-201ENST00000517028 307 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC022360.1-201ENST00000521058 340 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 MIR3614-201ENST00000581261 86 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC060766.1-201ENST00000590824 627 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC104695.2-201ENST00000605056 775 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 AC010245.2-201ENST00000606908 1167 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 MIR6839-201ENST00000620425 113 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 MTCO1P1-201ENST00000624263 1081 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.36□□□□□ -1.55
TREX1Q9NSU2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TREX1Q9NSU2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AL034549.2-201ENST00000618285 3373 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms